Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.64□□□□□ -0.39
P04436 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
P04436 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 GGTLC4P-201ENST00000402176 664 ntBASIC12.64□□□□□ -0.39
P04436 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.64□□□□□ -0.39
P04436 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.64□□□□□ -0.39
P04436 PIN4P1-201ENST00000451079 396 ntBASIC12.64□□□□□ -0.39
P04436 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.64□□□□□ -0.39
P04436 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.64□□□□□ -0.39
P04436 MIR3940-201ENST00000579148 102 ntBASIC12.64□□□□□ -0.39
P04436 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
P04436 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 AGAP10P-201ENST00000454844 2418 ntBASIC12.64□□□□□ -0.39
P04436 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.64□□□□□ -0.39
P04436 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.64□□□□□ -0.39
P04436 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.64□□□□□ -0.39
P04436 AC025183.3-201ENST00000623526 1482 ntBASIC12.64□□□□□ -0.39
P04436 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
P04436 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 AC040160.2-201ENST00000623816 1675 ntBASIC12.64□□□□□ -0.39
P04436 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
P04436 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04436 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.63□□□□□ -0.39
P04436 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.63□□□□□ -0.39
P04436 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 AL805961.2-201ENST00000642139 4817 ntBASIC12.63□□□□□ -0.39
P04436 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.63□□□□□ -0.39
P04436 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 AL359881.3-201ENST00000602640 1721 ntBASIC12.63□□□□□ -0.39
P04436 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.63□□□□□ -0.39
P04436 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
P04436 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
P04436 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.63□□□□□ -0.39
P04436 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.63□□□□□ -0.39
P04436 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.63□□□□□ -0.39
P04436 RN7SL818P-201ENST00000485099 259 ntBASIC12.63□□□□□ -0.39
P04436 CTBP2P4-201ENST00000513884 920 ntBASIC12.63□□□□□ -0.39
P04436 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.63□□□□□ -0.39
P04436 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
P04436 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.63□□□□□ -0.39
P04436 RN7SL725P-201ENST00000606439 259 ntBASIC12.63□□□□□ -0.39
P04436 AL118522.1-201ENST00000611368 560 ntBASIC12.63□□□□□ -0.39
P04436 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
P04436 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
P04436 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.63□□□□□ -0.39
P04436 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.63□□□□□ -0.39
P04436 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
P04436 AC111170.3-201ENST00000624282 2464 ntBASIC12.63□□□□□ -0.39
P04436 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
P04436 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
P04436 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
P04436 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04436 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms