RNA–Protein interactions for RNA: ENST00000266581.4

AMIGO2-201, Transcript of adhesion molecule with Ig like domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMIGO2, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO2-201ENST00000266581 NISCHQ9Y2I1 1504 aa27.68■■■□□ 2.02
AMIGO2-201ENST00000266581 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.68
AMIGO2-201ENST00000266581 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
AMIGO2-201ENST00000266581 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
AMIGO2-201ENST00000266581 PCGF6Q9BYE7 350 aa24.62■■□□□ 1.53
AMIGO2-201ENST00000266581 PPARGC1BQ86YN6 1023 aaKnown RBP24.49■■□□□ 1.51
AMIGO2-201ENST00000266581 HRCP23327 699 aa24.34■■□□□ 1.49
AMIGO2-201ENST00000266581 EHMT2Q96KQ7 1210 aa24.25■■□□□ 1.47
AMIGO2-201ENST00000266581 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
AMIGO2-201ENST00000266581 LOC105371045A0A1W2PR82 267 aa24.11■■□□□ 1.45
AMIGO2-201ENST00000266581 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
AMIGO2-201ENST00000266581 FAM9AQ8IZU1 332 aaPredicted RBP23.71■■□□□ 1.39
AMIGO2-201ENST00000266581 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
AMIGO2-201ENST00000266581 TRIM26Q12899 539 aaPredicted RBP23.39■■□□□ 1.33
AMIGO2-201ENST00000266581 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
AMIGO2-201ENST00000266581 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
AMIGO2-201ENST00000266581 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
AMIGO2-201ENST00000266581 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
AMIGO2-201ENST00000266581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
AMIGO2-201ENST00000266581 YTHDC1Q96MU7 727 aaKnown RBP22.9■■□□□ 1.26
AMIGO2-201ENST00000266581 CCER1Q8TC90 406 aaPredicted RBP22.88■■□□□ 1.25
AMIGO2-201ENST00000266581 ZEB1P37275 1124 aaPredicted RBP22.87■■□□□ 1.25
AMIGO2-201ENST00000266581 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
AMIGO2-201ENST00000266581 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
AMIGO2-201ENST00000266581 GTF3C3Q9Y5Q9 886 aa22.58■■□□□ 1.21
AMIGO2-201ENST00000266581 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
AMIGO2-201ENST00000266581 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
AMIGO2-201ENST00000266581 CENPBP07199 599 aaPredicted RBP22.49■■□□□ 1.19
AMIGO2-201ENST00000266581 DIEXFQ68CQ4 756 aaKnown RBP22.49■■□□□ 1.19
AMIGO2-201ENST00000266581 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
AMIGO2-201ENST00000266581 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
AMIGO2-201ENST00000266581 SCRIBQ14160 1630 aa22.38■■□□□ 1.17
AMIGO2-201ENST00000266581 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
AMIGO2-201ENST00000266581 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
AMIGO2-201ENST00000266581 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
AMIGO2-201ENST00000266581 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
AMIGO2-201ENST00000266581 ABCC9O60706 1549 aa22.05■■□□□ 1.12
AMIGO2-201ENST00000266581 MIER1Q8N108 512 aa21.99■■□□□ 1.11
AMIGO2-201ENST00000266581 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
AMIGO2-201ENST00000266581 APLP2Q06481 763 aa21.87■■□□□ 1.09
AMIGO2-201ENST00000266581 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
AMIGO2-201ENST00000266581 BCANQ96GW7 911 aa21.81■■□□□ 1.08
AMIGO2-201ENST00000266581 ITGAEP38570 1179 aa21.78■■□□□ 1.08
AMIGO2-201ENST00000266581 SOGA1O94964 1423 aa21.75■■□□□ 1.07
AMIGO2-201ENST00000266581 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
AMIGO2-201ENST00000266581 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
AMIGO2-201ENST00000266581 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
AMIGO2-201ENST00000266581 WIZO95785 1651 aa21.72■■□□□ 1.07
AMIGO2-201ENST00000266581 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
AMIGO2-201ENST00000266581 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
AMIGO2-201ENST00000266581 MYT1Q01538 1121 aa21.68■■□□□ 1.06
AMIGO2-201ENST00000266581 RUSC2Q8N2Y8 1516 aa21.63■■□□□ 1.05
AMIGO2-201ENST00000266581 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.02
AMIGO2-201ENST00000266581 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
AMIGO2-201ENST00000266581 KCNH8Q96L42 1107 aa21.38■■□□□ 1.01
AMIGO2-201ENST00000266581 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
AMIGO2-201ENST00000266581 SUPT16HQ9Y5B9 1047 aaKnown RBP21.33■■□□□ 1
AMIGO2-201ENST00000266581 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
AMIGO2-201ENST00000266581 WRNQ14191 1432 aaPredicted RBP eCLIP21.28■■□□□ 1
AMIGO2-201ENST00000266581 CLIP1P30622 1438 aa21.28■■□□□ 1
AMIGO2-201ENST00000266581 NEFLP07196 543 aa21.22■□□□□ 0.99
AMIGO2-201ENST00000266581 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
AMIGO2-201ENST00000266581 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
AMIGO2-201ENST00000266581 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
AMIGO2-201ENST00000266581 FKBP8Q14318 412 aa21.19■□□□□ 0.98
AMIGO2-201ENST00000266581 DDX10Q13206 875 aaKnown RBP21.17■□□□□ 0.98
AMIGO2-201ENST00000266581 BAZ1AQ9NRL2 1556 aaPredicted RBP21.15■□□□□ 0.98
AMIGO2-201ENST00000266581 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
AMIGO2-201ENST00000266581 TSHZ2Q9NRE2 1034 aa21.12■□□□□ 0.97
AMIGO2-201ENST00000266581 NACADO15069 1562 aa21.1■□□□□ 0.97
AMIGO2-201ENST00000266581 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
AMIGO2-201ENST00000266581 IRX6P78412 446 aaPredicted RBP21.06■□□□□ 0.96
AMIGO2-201ENST00000266581 FAM50AQ14320 339 aaKnown RBP21.06■□□□□ 0.96
AMIGO2-201ENST00000266581 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
AMIGO2-201ENST00000266581 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
AMIGO2-201ENST00000266581 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
AMIGO2-201ENST00000266581 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
AMIGO2-201ENST00000266581 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
AMIGO2-201ENST00000266581 DHX57Q6P158 1386 aaKnown RBP20.98■□□□□ 0.95
AMIGO2-201ENST00000266581 EEA1Q15075 1411 aa20.97■□□□□ 0.95
AMIGO2-201ENST00000266581 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
AMIGO2-201ENST00000266581 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
AMIGO2-201ENST00000266581 ANP32EQ9BTT0 268 aa20.92■□□□□ 0.94
AMIGO2-201ENST00000266581 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
AMIGO2-201ENST00000266581 SMARCA4P51532 1647 aa20.89■□□□□ 0.94
AMIGO2-201ENST00000266581 BCL11AQ9H165 835 aa20.88■□□□□ 0.93
AMIGO2-201ENST00000266581 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
AMIGO2-201ENST00000266581 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
AMIGO2-201ENST00000266581 KIF21BO75037 1637 aa20.76■□□□□ 0.91
AMIGO2-201ENST00000266581 RBM19Q9Y4C8 960 aaKnown RBP20.74■□□□□ 0.91
AMIGO2-201ENST00000266581 ANP32CO43423 234 aa20.73■□□□□ 0.91
AMIGO2-201ENST00000266581 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
AMIGO2-201ENST00000266581 CCNB3Q8WWL7 1395 aa20.7■□□□□ 0.9
AMIGO2-201ENST00000266581 HNRNPUQ00839 825 aaKnown RBP eCLIP20.68■□□□□ 0.9
AMIGO2-201ENST00000266581 NBR1Q14596 966 aa20.65■□□□□ 0.9
AMIGO2-201ENST00000266581 CLSPNQ9HAW4 1339 aa20.63■□□□□ 0.89
AMIGO2-201ENST00000266581 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
AMIGO2-201ENST00000266581 ARID3CA6NKF2 412 aa20.61■□□□□ 0.89
AMIGO2-201ENST00000266581 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
AMIGO2-201ENST00000266581 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms