RNA–Protein interactions for RNA: ENST00000422959.6

PHTF2-206, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PHTF2, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-206ENST00000422959 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
PHTF2-206ENST00000422959 SHROOM4Q9ULL8 1493 aa25.93■■□□□ 1.74
PHTF2-206ENST00000422959 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.69
PHTF2-206ENST00000422959 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
PHTF2-206ENST00000422959 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
PHTF2-206ENST00000422959 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
PHTF2-206ENST00000422959 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
PHTF2-206ENST00000422959 PCGF6Q9BYE7 350 aa24■■□□□ 1.43
PHTF2-206ENST00000422959 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
PHTF2-206ENST00000422959 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
PHTF2-206ENST00000422959 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
PHTF2-206ENST00000422959 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
PHTF2-206ENST00000422959 PPARGC1BQ86YN6 1023 aaKnown RBP23.61■■□□□ 1.37
PHTF2-206ENST00000422959 HRCP23327 699 aa23.43■■□□□ 1.34
PHTF2-206ENST00000422959 TRIM41Q8WV44 630 aa23.39■■□□□ 1.34
PHTF2-206ENST00000422959 ABCC9O60706 1549 aa23.37■■□□□ 1.33
PHTF2-206ENST00000422959 SCRIBQ14160 1630 aa23.27■■□□□ 1.32
PHTF2-206ENST00000422959 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
PHTF2-206ENST00000422959 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
PHTF2-206ENST00000422959 TRIM26Q12899 539 aaPredicted RBP22.96■■□□□ 1.27
PHTF2-206ENST00000422959 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
PHTF2-206ENST00000422959 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
PHTF2-206ENST00000422959 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.24
PHTF2-206ENST00000422959 RB1CC1Q8TDY2 1594 aa22.75■■□□□ 1.23
PHTF2-206ENST00000422959 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
PHTF2-206ENST00000422959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
PHTF2-206ENST00000422959 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.21
PHTF2-206ENST00000422959 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
PHTF2-206ENST00000422959 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
PHTF2-206ENST00000422959 WIZO95785 1651 aa22.41■■□□□ 1.18
PHTF2-206ENST00000422959 NACADO15069 1562 aa22.28■■□□□ 1.16
PHTF2-206ENST00000422959 ZEB1P37275 1124 aaPredicted RBP22.24■■□□□ 1.15
PHTF2-206ENST00000422959 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
PHTF2-206ENST00000422959 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
PHTF2-206ENST00000422959 CCDC88BA6NC98 1476 aa22.13■■□□□ 1.13
PHTF2-206ENST00000422959 SOGA1O94964 1423 aa22.13■■□□□ 1.13
PHTF2-206ENST00000422959 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
PHTF2-206ENST00000422959 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
PHTF2-206ENST00000422959 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
PHTF2-206ENST00000422959 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
PHTF2-206ENST00000422959 APLP2Q06481 763 aa21.92■■□□□ 1.1
PHTF2-206ENST00000422959 CEP162Q5TB80 1403 aa21.9■■□□□ 1.1
PHTF2-206ENST00000422959 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.08
PHTF2-206ENST00000422959 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
PHTF2-206ENST00000422959 ITGAEP38570 1179 aa21.81■■□□□ 1.08
PHTF2-206ENST00000422959 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
PHTF2-206ENST00000422959 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
PHTF2-206ENST00000422959 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
PHTF2-206ENST00000422959 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
PHTF2-206ENST00000422959 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
PHTF2-206ENST00000422959 NEUROD1Q13562 356 aa21.68■■□□□ 1.06
PHTF2-206ENST00000422959 TNIKQ9UKE5 1360 aa21.64■■□□□ 1.05
PHTF2-206ENST00000422959 GTF3C3Q9Y5Q9 886 aa21.55■■□□□ 1.04
PHTF2-206ENST00000422959 CLIP1P30622 1438 aa21.54■■□□□ 1.04
PHTF2-206ENST00000422959 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
PHTF2-206ENST00000422959 P3H3Q8IVL6 736 aa21.52■■□□□ 1.04
PHTF2-206ENST00000422959 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
PHTF2-206ENST00000422959 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
PHTF2-206ENST00000422959 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
PHTF2-206ENST00000422959 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
PHTF2-206ENST00000422959 ZNF316A6NFI3 1004 aaPredicted RBP21.47■■□□□ 1.03
PHTF2-206ENST00000422959 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
PHTF2-206ENST00000422959 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
PHTF2-206ENST00000422959 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
PHTF2-206ENST00000422959 CENPBP07199 599 aaPredicted RBP21.44■■□□□ 1.02
PHTF2-206ENST00000422959 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
PHTF2-206ENST00000422959 MIER1Q8N108 512 aa21.41■■□□□ 1.02
PHTF2-206ENST00000422959 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
PHTF2-206ENST00000422959 EEA1Q15075 1411 aa21.35■■□□□ 1.01
PHTF2-206ENST00000422959 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
PHTF2-206ENST00000422959 FAM50AQ14320 339 aaKnown RBP21.25■□□□□ 0.99
PHTF2-206ENST00000422959 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
PHTF2-206ENST00000422959 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
PHTF2-206ENST00000422959 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
PHTF2-206ENST00000422959 KIF21BO75037 1637 aa21.05■□□□□ 0.96
PHTF2-206ENST00000422959 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
PHTF2-206ENST00000422959 SIN3AQ96ST3 1273 aa21.01■□□□□ 0.95
PHTF2-206ENST00000422959 CUX2O14529 1486 aa21■□□□□ 0.95
PHTF2-206ENST00000422959 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
PHTF2-206ENST00000422959 KCNH8Q96L42 1107 aa20.93■□□□□ 0.94
PHTF2-206ENST00000422959 CUX1P39880 1505 aa20.93■□□□□ 0.94
PHTF2-206ENST00000422959 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
PHTF2-206ENST00000422959 PEG3Q9GZU2 1588 aa20.91■□□□□ 0.94
PHTF2-206ENST00000422959 DHX57Q6P158 1386 aaKnown RBP20.91■□□□□ 0.94
PHTF2-206ENST00000422959 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
PHTF2-206ENST00000422959 BCANQ96GW7 911 aa20.88■□□□□ 0.93
PHTF2-206ENST00000422959 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
PHTF2-206ENST00000422959 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
PHTF2-206ENST00000422959 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
PHTF2-206ENST00000422959 CNGB1Q14028 1251 aaPredicted RBP20.85■□□□□ 0.93
PHTF2-206ENST00000422959 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
PHTF2-206ENST00000422959 IGF1RP08069 1367 aa20.84■□□□□ 0.93
PHTF2-206ENST00000422959 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
PHTF2-206ENST00000422959 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
PHTF2-206ENST00000422959 CHIC2Q9UKJ5 165 aa20.81■□□□□ 0.92
PHTF2-206ENST00000422959 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
PHTF2-206ENST00000422959 RAB3GAP2Q9H2M9 1393 aa20.77■□□□□ 0.92
PHTF2-206ENST00000422959 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
PHTF2-206ENST00000422959 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.91
PHTF2-206ENST00000422959 FHOD3Q2V2M9 1422 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms