RNA–Protein interactions for RNA: ENST00000589049.5

TPGS2-209, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 1 (best) BASIC

Gene TPGS2, Length 1,102 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-209ENST00000589049 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.2
TPGS2-209ENST00000589049 ABCC9O60706 1549 aa32.11■■■□□ 2.73
TPGS2-209ENST00000589049 CCDC180Q9P1Z9 1646 aa31.72■■■□□ 2.67
TPGS2-209ENST00000589049 DNAJC5BQ9UF47 199 aa30.5■■■□□ 2.47
TPGS2-209ENST00000589049 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
TPGS2-209ENST00000589049 NACADO15069 1562 aa30.1■■■□□ 2.41
TPGS2-209ENST00000589049 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.35
TPGS2-209ENST00000589049 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
TPGS2-209ENST00000589049 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
TPGS2-209ENST00000589049 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
TPGS2-209ENST00000589049 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
TPGS2-209ENST00000589049 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.26
TPGS2-209ENST00000589049 CECR2Q9BXF3 1484 aa29.02■■■□□ 2.24
TPGS2-209ENST00000589049 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
TPGS2-209ENST00000589049 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
TPGS2-209ENST00000589049 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
TPGS2-209ENST00000589049 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
TPGS2-209ENST00000589049 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
TPGS2-209ENST00000589049 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
TPGS2-209ENST00000589049 CUX2O14529 1486 aa28■■■□□ 2.07
TPGS2-209ENST00000589049 ERCC6Q03468 1493 aa27.83■■■□□ 2.04
TPGS2-209ENST00000589049 NCAPD3P42695 1498 aa27.76■■■□□ 2.04
TPGS2-209ENST00000589049 ATAD2BQ9ULI0 1458 aa27.58■■■□□ 2.01
TPGS2-209ENST00000589049 HMGXB3Q12766 1538 aa27.55■■■□□ 2
TPGS2-209ENST00000589049 SMARCA2P51531 1590 aa27.53■■■□□ 2
TPGS2-209ENST00000589049 SMARCA4P51532 1647 aa27.44■■□□□ 1.98
TPGS2-209ENST00000589049 NESP48681 1621 aa27.41■■□□□ 1.98
TPGS2-209ENST00000589049 THOC2Q8NI27 1593 aaKnown RBP27.32■■□□□ 1.96
TPGS2-209ENST00000589049 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
TPGS2-209ENST00000589049 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
TPGS2-209ENST00000589049 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
TPGS2-209ENST00000589049 PEG3Q9GZU2 1588 aa27.21■■□□□ 1.95
TPGS2-209ENST00000589049 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
TPGS2-209ENST00000589049 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
TPGS2-209ENST00000589049 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
TPGS2-209ENST00000589049 MROH2BQ7Z745 1585 aa26.93■■□□□ 1.9
TPGS2-209ENST00000589049 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
TPGS2-209ENST00000589049 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
TPGS2-209ENST00000589049 WDR62O43379 1518 aa26.85■■□□□ 1.89
TPGS2-209ENST00000589049 CEP164Q9UPV0 1460 aa26.68■■□□□ 1.86
TPGS2-209ENST00000589049 WIZO95785 1651 aa26.58■■□□□ 1.85
TPGS2-209ENST00000589049 FANCD2Q9BXW9 1451 aa26.57■■□□□ 1.84
TPGS2-209ENST00000589049 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
TPGS2-209ENST00000589049 CFTRP13569 1480 aa26.47■■□□□ 1.83
TPGS2-209ENST00000589049 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
TPGS2-209ENST00000589049 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
TPGS2-209ENST00000589049 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
TPGS2-209ENST00000589049 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
TPGS2-209ENST00000589049 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
TPGS2-209ENST00000589049 PRDM2Q13029 1718 aa26.19■■□□□ 1.78
TPGS2-209ENST00000589049 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
TPGS2-209ENST00000589049 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
TPGS2-209ENST00000589049 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
TPGS2-209ENST00000589049 ZNF608Q9ULD9 1512 aaPredicted RBP26.1■■□□□ 1.77
TPGS2-209ENST00000589049 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
TPGS2-209ENST00000589049 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
TPGS2-209ENST00000589049 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
TPGS2-209ENST00000589049 CYB5RLQ6IPT4 315 aa25.93■■□□□ 1.74
TPGS2-209ENST00000589049 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
TPGS2-209ENST00000589049 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
TPGS2-209ENST00000589049 CHD1O14646 1710 aa25.88■■□□□ 1.73
TPGS2-209ENST00000589049 ARAP1Q96P48 1450 aa25.84■■□□□ 1.73
TPGS2-209ENST00000589049 TARBP1Q13395 1621 aaKnown RBP25.82■■□□□ 1.72
TPGS2-209ENST00000589049 TRHP20396 242 aaPredicted RBP25.82■■□□□ 1.72
TPGS2-209ENST00000589049 AQRO60306 1485 aaKnown RBP eCLIP25.8■■□□□ 1.721e-6■■□□□ 12.5
TPGS2-209ENST00000589049 FBLN2P98095 1184 aa25.73■■□□□ 1.71
TPGS2-209ENST00000589049 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
TPGS2-209ENST00000589049 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
TPGS2-209ENST00000589049 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
TPGS2-209ENST00000589049 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.69
TPGS2-209ENST00000589049 SOGA1O94964 1423 aa25.57■■□□□ 1.68
TPGS2-209ENST00000589049 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
TPGS2-209ENST00000589049 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
TPGS2-209ENST00000589049 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
TPGS2-209ENST00000589049 MAGI1Q96QZ7 1491 aaPredicted RBP25.53■■□□□ 1.68
TPGS2-209ENST00000589049 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
TPGS2-209ENST00000589049 CHMP7Q8WUX9 453 aaPredicted RBP25.49■■□□□ 1.67
TPGS2-209ENST00000589049 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
TPGS2-209ENST00000589049 GRIN2BQ13224 1484 aa25.45■■□□□ 1.66
TPGS2-209ENST00000589049 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
TPGS2-209ENST00000589049 CUX1P39880 1505 aa25.35■■□□□ 1.65
TPGS2-209ENST00000589049 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
TPGS2-209ENST00000589049 PBRM1Q86U86 1689 aa25.3■■□□□ 1.64
TPGS2-209ENST00000589049 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
TPGS2-209ENST00000589049 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
TPGS2-209ENST00000589049 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
TPGS2-209ENST00000589049 ERCC6L2Q5T890 1561 aa25.08■■□□□ 1.61
TPGS2-209ENST00000589049 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
TPGS2-209ENST00000589049 NUP160Q12769 1436 aa25.05■■□□□ 1.6
TPGS2-209ENST00000589049 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
TPGS2-209ENST00000589049 SHROOM2Q13796 1616 aa25.01■■□□□ 1.59
TPGS2-209ENST00000589049 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
TPGS2-209ENST00000589049 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
TPGS2-209ENST00000589049 KIF13AQ9H1H9 1805 aa24.93■■□□□ 1.58
TPGS2-209ENST00000589049 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
TPGS2-209ENST00000589049 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
TPGS2-209ENST00000589049 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
TPGS2-209ENST00000589049 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
TPGS2-209ENST00000589049 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
TPGS2-209ENST00000589049 MAPKBP1O60336 1514 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms