RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 NISCHQ9Y2I1 1504 aa33.32■■■□□ 2.92
MRPL55-205ENST00000366731 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
MRPL55-205ENST00000366731 ABCC9O60706 1549 aa29.38■■■□□ 2.29
MRPL55-205ENST00000366731 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
MRPL55-205ENST00000366731 RB1CC1Q8TDY2 1594 aa28.02■■■□□ 2.08
MRPL55-205ENST00000366731 NACADO15069 1562 aa27.92■■■□□ 2.06
MRPL55-205ENST00000366731 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
MRPL55-205ENST00000366731 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
MRPL55-205ENST00000366731 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
MRPL55-205ENST00000366731 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.99
MRPL55-205ENST00000366731 UNC13AQ9UPW8 1703 aa27.31■■□□□ 1.96
MRPL55-205ENST00000366731 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
MRPL55-205ENST00000366731 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
MRPL55-205ENST00000366731 SCRIBQ14160 1630 aa27.14■■□□□ 1.94
MRPL55-205ENST00000366731 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
MRPL55-205ENST00000366731 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
MRPL55-205ENST00000366731 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
MRPL55-205ENST00000366731 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
MRPL55-205ENST00000366731 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
MRPL55-205ENST00000366731 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.73
MRPL55-205ENST00000366731 NCAPD3P42695 1498 aa25.82■■□□□ 1.72
MRPL55-205ENST00000366731 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
MRPL55-205ENST00000366731 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
MRPL55-205ENST00000366731 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
MRPL55-205ENST00000366731 BAZ1BQ9UIG0 1483 aaKnown RBP25.62■■□□□ 1.69
MRPL55-205ENST00000366731 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
MRPL55-205ENST00000366731 PEG3Q9GZU2 1588 aa25.55■■□□□ 1.68
MRPL55-205ENST00000366731 WIZO95785 1651 aa25.41■■□□□ 1.66
MRPL55-205ENST00000366731 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
MRPL55-205ENST00000366731 NESP48681 1621 aa25.36■■□□□ 1.65
MRPL55-205ENST00000366731 ERCC6Q03468 1493 aa25.32■■□□□ 1.64
MRPL55-205ENST00000366731 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
MRPL55-205ENST00000366731 LAMC3Q9Y6N6 1575 aa25.11■■□□□ 1.61
MRPL55-205ENST00000366731 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
MRPL55-205ENST00000366731 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
MRPL55-205ENST00000366731 CUX2O14529 1486 aa25.01■■□□□ 1.59
MRPL55-205ENST00000366731 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
MRPL55-205ENST00000366731 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
MRPL55-205ENST00000366731 CFTRP13569 1480 aa24.87■■□□□ 1.57
MRPL55-205ENST00000366731 THOC2Q8NI27 1593 aaKnown RBP24.87■■□□□ 1.57
MRPL55-205ENST00000366731 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
MRPL55-205ENST00000366731 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
MRPL55-205ENST00000366731 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
MRPL55-205ENST00000366731 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
MRPL55-205ENST00000366731 WDR62O43379 1518 aa24.65■■□□□ 1.54
MRPL55-205ENST00000366731 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
MRPL55-205ENST00000366731 URB2Q14146 1524 aaKnown RBP24.57■■□□□ 1.52
MRPL55-205ENST00000366731 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
MRPL55-205ENST00000366731 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
MRPL55-205ENST00000366731 ABCC8Q09428 1581 aa24.31■■□□□ 1.48
MRPL55-205ENST00000366731 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
MRPL55-205ENST00000366731 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
MRPL55-205ENST00000366731 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
MRPL55-205ENST00000366731 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
MRPL55-205ENST00000366731 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.45
MRPL55-205ENST00000366731 CUX1P39880 1505 aa24.13■■□□□ 1.45
MRPL55-205ENST00000366731 SOGA1O94964 1423 aa24.12■■□□□ 1.45
MRPL55-205ENST00000366731 AQRO60306 1485 aaKnown RBP eCLIP24.11■■□□□ 1.458e-7■■■■■ 27.9
MRPL55-205ENST00000366731 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
MRPL55-205ENST00000366731 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
MRPL55-205ENST00000366731 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
MRPL55-205ENST00000366731 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
MRPL55-205ENST00000366731 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
MRPL55-205ENST00000366731 FBLN2P98095 1184 aa23.97■■□□□ 1.43
MRPL55-205ENST00000366731 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
MRPL55-205ENST00000366731 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
MRPL55-205ENST00000366731 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
MRPL55-205ENST00000366731 SNAPC4Q5SXM2 1469 aa23.83■■□□□ 1.41
MRPL55-205ENST00000366731 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
MRPL55-205ENST00000366731 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
MRPL55-205ENST00000366731 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
MRPL55-205ENST00000366731 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
MRPL55-205ENST00000366731 GAPVD1Q14C86 1478 aa23.8■■□□□ 1.4
MRPL55-205ENST00000366731 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
MRPL55-205ENST00000366731 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
MRPL55-205ENST00000366731 CHD1O14646 1710 aa23.75■■□□□ 1.39
MRPL55-205ENST00000366731 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
MRPL55-205ENST00000366731 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
MRPL55-205ENST00000366731 SYNJ2O15056 1496 aa23.66■■□□□ 1.38
MRPL55-205ENST00000366731 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
MRPL55-205ENST00000366731 RIMBP3CA6NJZ7 1639 aa23.61■■□□□ 1.37
MRPL55-205ENST00000366731 RIMBP3BA6NNM3 1639 aa23.61■■□□□ 1.37
MRPL55-205ENST00000366731 RIMBP3Q9UFD9 1639 aa23.61■■□□□ 1.37
MRPL55-205ENST00000366731 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
MRPL55-205ENST00000366731 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
MRPL55-205ENST00000366731 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
MRPL55-205ENST00000366731 CLASP1Q7Z460 1538 aa23.5■■□□□ 1.35
MRPL55-205ENST00000366731 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
MRPL55-205ENST00000366731 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
MRPL55-205ENST00000366731 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
MRPL55-205ENST00000366731 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
MRPL55-205ENST00000366731 ARAP1Q96P48 1450 aa23.42■■□□□ 1.34
MRPL55-205ENST00000366731 IGF1RP08069 1367 aa23.4■■□□□ 1.34
MRPL55-205ENST00000366731 NUP160Q12769 1436 aa23.38■■□□□ 1.33
MRPL55-205ENST00000366731 CEP170Q5SW79 1584 aa23.37■■□□□ 1.33
MRPL55-205ENST00000366731 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
MRPL55-205ENST00000366731 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
MRPL55-205ENST00000366731 ERCC6L2Q5T890 1561 aa23.25■■□□□ 1.31
MRPL55-205ENST00000366731 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
MRPL55-205ENST00000366731 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms