RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
TREX1-206ENST00000629913 CCDC180Q9P1Z9 1646 aa30.37■■■□□ 2.45
TREX1-206ENST00000629913 ABCC9O60706 1549 aa30.02■■■□□ 2.4
TREX1-206ENST00000629913 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
TREX1-206ENST00000629913 NACADO15069 1562 aa28.63■■■□□ 2.17
TREX1-206ENST00000629913 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
TREX1-206ENST00000629913 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
TREX1-206ENST00000629913 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
TREX1-206ENST00000629913 DCAF1Q9Y4B6 1507 aa28.11■■■□□ 2.09
TREX1-206ENST00000629913 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
TREX1-206ENST00000629913 PABPN1Q86U42 306 aaKnown RBP eCLIP27.97■■■□□ 2.07
TREX1-206ENST00000629913 BICRAQ9NZM4 1560 aa27.91■■■□□ 2.06
TREX1-206ENST00000629913 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
TREX1-206ENST00000629913 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
TREX1-206ENST00000629913 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
TREX1-206ENST00000629913 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
TREX1-206ENST00000629913 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
TREX1-206ENST00000629913 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
TREX1-206ENST00000629913 SMARCA4P51532 1647 aa26.44■■□□□ 1.82
TREX1-206ENST00000629913 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
TREX1-206ENST00000629913 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
TREX1-206ENST00000629913 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
TREX1-206ENST00000629913 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
TREX1-206ENST00000629913 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
TREX1-206ENST00000629913 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.79
TREX1-206ENST00000629913 MROH2BQ7Z745 1585 aa26.17■■□□□ 1.78
TREX1-206ENST00000629913 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
TREX1-206ENST00000629913 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
TREX1-206ENST00000629913 NESP48681 1621 aa25.89■■□□□ 1.74
TREX1-206ENST00000629913 WIZO95785 1651 aa25.87■■□□□ 1.73
TREX1-206ENST00000629913 CUX2O14529 1486 aa25.79■■□□□ 1.72
TREX1-206ENST00000629913 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
TREX1-206ENST00000629913 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
TREX1-206ENST00000629913 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
TREX1-206ENST00000629913 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
TREX1-206ENST00000629913 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
TREX1-206ENST00000629913 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.69
TREX1-206ENST00000629913 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
TREX1-206ENST00000629913 CFTRP13569 1480 aa25.41■■□□□ 1.66
TREX1-206ENST00000629913 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
TREX1-206ENST00000629913 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
TREX1-206ENST00000629913 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
TREX1-206ENST00000629913 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
TREX1-206ENST00000629913 WDR62O43379 1518 aa25.33■■□□□ 1.65
TREX1-206ENST00000629913 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
TREX1-206ENST00000629913 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
TREX1-206ENST00000629913 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
TREX1-206ENST00000629913 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
TREX1-206ENST00000629913 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
TREX1-206ENST00000629913 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
TREX1-206ENST00000629913 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
TREX1-206ENST00000629913 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
TREX1-206ENST00000629913 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
TREX1-206ENST00000629913 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
TREX1-206ENST00000629913 TARBP1Q13395 1621 aaKnown RBP24.66■■□□□ 1.54
TREX1-206ENST00000629913 EIF4G3O43432 1585 aaKnown RBP24.64■■□□□ 1.54
TREX1-206ENST00000629913 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
TREX1-206ENST00000629913 CUX1P39880 1505 aa24.59■■□□□ 1.53
TREX1-206ENST00000629913 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
TREX1-206ENST00000629913 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
TREX1-206ENST00000629913 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.52
TREX1-206ENST00000629913 SOGA1O94964 1423 aa24.52■■□□□ 1.52
TREX1-206ENST00000629913 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
TREX1-206ENST00000629913 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
TREX1-206ENST00000629913 CHD1O14646 1710 aa24.38■■□□□ 1.49
TREX1-206ENST00000629913 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
TREX1-206ENST00000629913 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
TREX1-206ENST00000629913 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
TREX1-206ENST00000629913 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
TREX1-206ENST00000629913 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
TREX1-206ENST00000629913 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
TREX1-206ENST00000629913 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
TREX1-206ENST00000629913 MAGI1Q96QZ7 1491 aaPredicted RBP24.28■■□□□ 1.48
TREX1-206ENST00000629913 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
TREX1-206ENST00000629913 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
TREX1-206ENST00000629913 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
TREX1-206ENST00000629913 FBLN2P98095 1184 aa24.26■■□□□ 1.47
TREX1-206ENST00000629913 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
TREX1-206ENST00000629913 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
TREX1-206ENST00000629913 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
TREX1-206ENST00000629913 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
TREX1-206ENST00000629913 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
TREX1-206ENST00000629913 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
TREX1-206ENST00000629913 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
TREX1-206ENST00000629913 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.45
TREX1-206ENST00000629913 ADAMTS12P58397 1594 aa24.04■■□□□ 1.44
TREX1-206ENST00000629913 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
TREX1-206ENST00000629913 GRIN2AQ12879 1464 aa24■■□□□ 1.43
TREX1-206ENST00000629913 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
TREX1-206ENST00000629913 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
TREX1-206ENST00000629913 FHAD1B1AJZ9 1412 aa23.96■■□□□ 1.43
TREX1-206ENST00000629913 NUP160Q12769 1436 aa23.92■■□□□ 1.42
TREX1-206ENST00000629913 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
TREX1-206ENST00000629913 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
TREX1-206ENST00000629913 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
TREX1-206ENST00000629913 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
TREX1-206ENST00000629913 IGF1RP08069 1367 aa23.74■■□□□ 1.39
TREX1-206ENST00000629913 CUL7Q14999 1698 aa23.71■■□□□ 1.39
TREX1-206ENST00000629913 RUSC2Q8N2Y8 1516 aa23.7■■□□□ 1.38
TREX1-206ENST00000629913 PRG4Q92954 1404 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms