RNA–Protein interactions for RNA: ENST00000623816.1

AC040160.2-201, humanhuman

BASIC

Gene AC040160.2, Length 1,675 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040160.2-201ENST00000623816 AEBP2Q6ZN18 517 aaPredicted RBP36.14■■■■□ 3.38
AC040160.2-201ENST00000623816 CHIC1Q5VXU3 224 aa35.72■■■■□ 3.31
AC040160.2-201ENST00000623816 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
AC040160.2-201ENST00000623816 PHF23Q9BUL5 403 aaPredicted RBP31.53■■■□□ 2.64
AC040160.2-201ENST00000623816 SENP3Q9H4L4 574 aaPredicted RBP30.51■■■□□ 2.47
AC040160.2-201ENST00000623816 PLPPR3Q6T4P5 718 aa29.21■■■□□ 2.27
AC040160.2-201ENST00000623816 FOXD1Q16676 465 aa28.31■■■□□ 2.12
AC040160.2-201ENST00000623816 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
AC040160.2-201ENST00000623816 PPP6R1Q9UPN7 881 aa27.68■■■□□ 2.02
AC040160.2-201ENST00000623816 ADRA2BP18089 450 aa27.68■■■□□ 2.02
AC040160.2-201ENST00000623816 PIAS4Q8N2W9 510 aaPredicted RBP26.81■■□□□ 1.88
AC040160.2-201ENST00000623816 ABCC9O60706 1549 aa26.78■■□□□ 1.88
AC040160.2-201ENST00000623816 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
AC040160.2-201ENST00000623816 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
AC040160.2-201ENST00000623816 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
AC040160.2-201ENST00000623816 MYO15BQ96JP2 1530 aa26.16■■□□□ 1.78
AC040160.2-201ENST00000623816 NACADO15069 1562 aa26.11■■□□□ 1.77
AC040160.2-201ENST00000623816 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
AC040160.2-201ENST00000623816 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
AC040160.2-201ENST00000623816 MSH5O43196 834 aa25.83■■□□□ 1.73
AC040160.2-201ENST00000623816 KCNA4P22459 653 aa25.83■■□□□ 1.73
AC040160.2-201ENST00000623816 PPP4R3CPQ6ZMV5 832 aa25.83■■□□□ 1.73
AC040160.2-201ENST00000623816 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
AC040160.2-201ENST00000623816 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
AC040160.2-201ENST00000623816 NCBP3Q53F19 620 aaKnown RBP25.25■■□□□ 1.63
AC040160.2-201ENST00000623816 PABPN1Q86U42 306 aaKnown RBP eCLIP25.25■■□□□ 1.63
AC040160.2-201ENST00000623816 SCAF1Q9H7N4 1312 aaKnown RBP25.22■■□□□ 1.63
AC040160.2-201ENST00000623816 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
AC040160.2-201ENST00000623816 MAPK8IP2Q13387 824 aaPredicted RBP24.99■■□□□ 1.59
AC040160.2-201ENST00000623816 CNKSR2Q8WXI2 1034 aa24.97■■□□□ 1.59
AC040160.2-201ENST00000623816 NPM3O75607 178 aaKnown RBP24.94■■□□□ 1.58
AC040160.2-201ENST00000623816 EHMT2Q96KQ7 1210 aa24.85■■□□□ 1.57
AC040160.2-201ENST00000623816 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
AC040160.2-201ENST00000623816 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
AC040160.2-201ENST00000623816 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
AC040160.2-201ENST00000623816 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
AC040160.2-201ENST00000623816 SLC4A1APQ9BWU0 796 aaKnown RBP24.66■■□□□ 1.54
AC040160.2-201ENST00000623816 MROH2BQ7Z745 1585 aa24.65■■□□□ 1.54
AC040160.2-201ENST00000623816 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
AC040160.2-201ENST00000623816 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
AC040160.2-201ENST00000623816 DMRT2Q9Y5R5 561 aa24.44■■□□□ 1.5
AC040160.2-201ENST00000623816 WIZO95785 1651 aa24.39■■□□□ 1.49
AC040160.2-201ENST00000623816 RNF216Q9NWF9 866 aaPredicted RBP24.35■■□□□ 1.49
AC040160.2-201ENST00000623816 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
AC040160.2-201ENST00000623816 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
AC040160.2-201ENST00000623816 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
AC040160.2-201ENST00000623816 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
AC040160.2-201ENST00000623816 TOP2AP11388 1531 aaKnown RBP24.16■■□□□ 1.46
AC040160.2-201ENST00000623816 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
AC040160.2-201ENST00000623816 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
AC040160.2-201ENST00000623816 HOXD11P31277 338 aaPredicted RBP24.13■■□□□ 1.45
AC040160.2-201ENST00000623816 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
AC040160.2-201ENST00000623816 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
AC040160.2-201ENST00000623816 HMGXB3Q12766 1538 aa24.04■■□□□ 1.44
AC040160.2-201ENST00000623816 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
AC040160.2-201ENST00000623816 ZBTB22O15209 634 aa23.8■■□□□ 1.4
AC040160.2-201ENST00000623816 FOXD4L1Q9NU39 408 aa23.57■■□□□ 1.36
AC040160.2-201ENST00000623816 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
AC040160.2-201ENST00000623816 CFTRP13569 1480 aa23.51■■□□□ 1.35
AC040160.2-201ENST00000623816 SLC4A2P04920 1241 aa23.45■■□□□ 1.34
AC040160.2-201ENST00000623816 DCAF8L1A6NGE4 600 aa23.41■■□□□ 1.34
AC040160.2-201ENST00000623816 NESP48681 1621 aa23.39■■□□□ 1.33
AC040160.2-201ENST00000623816 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
AC040160.2-201ENST00000623816 LAMC3Q9Y6N6 1575 aa23.33■■□□□ 1.33
AC040160.2-201ENST00000623816 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
AC040160.2-201ENST00000623816 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
AC040160.2-201ENST00000623816 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
AC040160.2-201ENST00000623816 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
AC040160.2-201ENST00000623816 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
AC040160.2-201ENST00000623816 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
AC040160.2-201ENST00000623816 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
AC040160.2-201ENST00000623816 CUX1P39880 1505 aa23.06■■□□□ 1.28
AC040160.2-201ENST00000623816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.03■■□□□ 1.28
AC040160.2-201ENST00000623816 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
AC040160.2-201ENST00000623816 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
AC040160.2-201ENST00000623816 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
AC040160.2-201ENST00000623816 MYCNP04198 464 aaPredicted RBP22.99■■□□□ 1.27
AC040160.2-201ENST00000623816 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
AC040160.2-201ENST00000623816 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
AC040160.2-201ENST00000623816 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
AC040160.2-201ENST00000623816 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
AC040160.2-201ENST00000623816 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
AC040160.2-201ENST00000623816 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
AC040160.2-201ENST00000623816 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
AC040160.2-201ENST00000623816 SOGA1O94964 1423 aa22.86■■□□□ 1.25
AC040160.2-201ENST00000623816 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
AC040160.2-201ENST00000623816 WDR62O43379 1518 aa22.77■■□□□ 1.24
AC040160.2-201ENST00000623816 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
AC040160.2-201ENST00000623816 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
AC040160.2-201ENST00000623816 EEA1Q15075 1411 aa22.75■■□□□ 1.23
AC040160.2-201ENST00000623816 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
AC040160.2-201ENST00000623816 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
AC040160.2-201ENST00000623816 U3KPZ7 1027 aaPredicted RBP22.71■■□□□ 1.23
AC040160.2-201ENST00000623816 CUX2O14529 1486 aa22.71■■□□□ 1.23
AC040160.2-201ENST00000623816 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
AC040160.2-201ENST00000623816 ATXN8OSP0DMR3 200 aa22.67■■□□□ 1.22
AC040160.2-201ENST00000623816 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
AC040160.2-201ENST00000623816 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
AC040160.2-201ENST00000623816 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
AC040160.2-201ENST00000623816 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms