RNA–Protein interactions for RNA: ENST00000423540.6

CXorf40A-205, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXorf40A, Length 1,208 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-205ENST00000423540 NISCHQ9Y2I1 1504 aa33.75■■■□□ 2.99
CXorf40A-205ENST00000423540 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
CXorf40A-205ENST00000423540 ABCC9O60706 1549 aa29.66■■■□□ 2.34
CXorf40A-205ENST00000423540 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
CXorf40A-205ENST00000423540 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
CXorf40A-205ENST00000423540 NACADO15069 1562 aa28.26■■■□□ 2.11
CXorf40A-205ENST00000423540 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
CXorf40A-205ENST00000423540 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
CXorf40A-205ENST00000423540 DCAF1Q9Y4B6 1507 aa27.83■■■□□ 2.05
CXorf40A-205ENST00000423540 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
CXorf40A-205ENST00000423540 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
CXorf40A-205ENST00000423540 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
CXorf40A-205ENST00000423540 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
CXorf40A-205ENST00000423540 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
CXorf40A-205ENST00000423540 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
CXorf40A-205ENST00000423540 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
CXorf40A-205ENST00000423540 CC2D2AQ9P2K1 1620 aa26.79■■□□□ 1.88
CXorf40A-205ENST00000423540 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
CXorf40A-205ENST00000423540 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
CXorf40A-205ENST00000423540 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
CXorf40A-205ENST00000423540 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
CXorf40A-205ENST00000423540 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
CXorf40A-205ENST00000423540 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
CXorf40A-205ENST00000423540 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
CXorf40A-205ENST00000423540 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
CXorf40A-205ENST00000423540 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
CXorf40A-205ENST00000423540 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
CXorf40A-205ENST00000423540 WIZO95785 1651 aa25.79■■□□□ 1.72
CXorf40A-205ENST00000423540 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
CXorf40A-205ENST00000423540 NESP48681 1621 aa25.65■■□□□ 1.7
CXorf40A-205ENST00000423540 ERCC6Q03468 1493 aa25.51■■□□□ 1.67
CXorf40A-205ENST00000423540 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
CXorf40A-205ENST00000423540 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
CXorf40A-205ENST00000423540 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
CXorf40A-205ENST00000423540 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
CXorf40A-205ENST00000423540 CUX2O14529 1486 aa25.26■■□□□ 1.63
CXorf40A-205ENST00000423540 PDS5BQ9NTI5 1447 aa25.25■■□□□ 1.63
CXorf40A-205ENST00000423540 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
CXorf40A-205ENST00000423540 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
CXorf40A-205ENST00000423540 CFTRP13569 1480 aa25.16■■□□□ 1.62
CXorf40A-205ENST00000423540 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.6
CXorf40A-205ENST00000423540 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
CXorf40A-205ENST00000423540 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
CXorf40A-205ENST00000423540 WDR62O43379 1518 aa24.97■■□□□ 1.59
CXorf40A-205ENST00000423540 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
CXorf40A-205ENST00000423540 PRDM2Q13029 1718 aa24.95■■□□□ 1.58
CXorf40A-205ENST00000423540 URB2Q14146 1524 aaKnown RBP24.87■■□□□ 1.57
CXorf40A-205ENST00000423540 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
CXorf40A-205ENST00000423540 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
CXorf40A-205ENST00000423540 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
CXorf40A-205ENST00000423540 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
CXorf40A-205ENST00000423540 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
CXorf40A-205ENST00000423540 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
CXorf40A-205ENST00000423540 CUX1P39880 1505 aa24.45■■□□□ 1.5
CXorf40A-205ENST00000423540 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
CXorf40A-205ENST00000423540 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
CXorf40A-205ENST00000423540 RAD54L2Q9Y4B4 1467 aa24.4■■□□□ 1.5
CXorf40A-205ENST00000423540 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
CXorf40A-205ENST00000423540 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
CXorf40A-205ENST00000423540 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.49
CXorf40A-205ENST00000423540 SOGA1O94964 1423 aa24.34■■□□□ 1.49
CXorf40A-205ENST00000423540 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
CXorf40A-205ENST00000423540 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
CXorf40A-205ENST00000423540 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
CXorf40A-205ENST00000423540 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
CXorf40A-205ENST00000423540 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
CXorf40A-205ENST00000423540 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
CXorf40A-205ENST00000423540 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.46
CXorf40A-205ENST00000423540 CHD1O14646 1710 aa24.11■■□□□ 1.45
CXorf40A-205ENST00000423540 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
CXorf40A-205ENST00000423540 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
CXorf40A-205ENST00000423540 FBLN2P98095 1184 aa24.07■■□□□ 1.44
CXorf40A-205ENST00000423540 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
CXorf40A-205ENST00000423540 GAPVD1Q14C86 1478 aa24.04■■□□□ 1.44
CXorf40A-205ENST00000423540 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
CXorf40A-205ENST00000423540 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
CXorf40A-205ENST00000423540 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
CXorf40A-205ENST00000423540 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
CXorf40A-205ENST00000423540 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
CXorf40A-205ENST00000423540 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
CXorf40A-205ENST00000423540 RIMBP3CA6NJZ7 1639 aa23.9■■□□□ 1.42
CXorf40A-205ENST00000423540 RIMBP3BA6NNM3 1639 aa23.9■■□□□ 1.42
CXorf40A-205ENST00000423540 RIMBP3Q9UFD9 1639 aa23.9■■□□□ 1.42
CXorf40A-205ENST00000423540 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
CXorf40A-205ENST00000423540 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
CXorf40A-205ENST00000423540 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
CXorf40A-205ENST00000423540 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
CXorf40A-205ENST00000423540 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
CXorf40A-205ENST00000423540 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
CXorf40A-205ENST00000423540 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
CXorf40A-205ENST00000423540 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
CXorf40A-205ENST00000423540 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
CXorf40A-205ENST00000423540 NUP160Q12769 1436 aa23.65■■□□□ 1.38
CXorf40A-205ENST00000423540 KIF27Q86VH2 1401 aa23.65■■□□□ 1.38
CXorf40A-205ENST00000423540 IGF1RP08069 1367 aa23.65■■□□□ 1.38
CXorf40A-205ENST00000423540 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
CXorf40A-205ENST00000423540 RUSC2Q8N2Y8 1516 aa23.55■■□□□ 1.36
CXorf40A-205ENST00000423540 CUL7Q14999 1698 aa23.52■■□□□ 1.36
CXorf40A-205ENST00000423540 SHROOM2Q13796 1616 aa23.5■■□□□ 1.35
CXorf40A-205ENST00000423540 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms