RNA–Protein interactions for RNA: ENST00000265992.9

CCNJ-201, Transcript of cyclin J, humanhuman

TSL 1 (best) BASIC

Gene CCNJ, Length 4,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNJ-201ENST00000265992 NISCHQ9Y2I1 1504 aa24.95■■□□□ 1.58
CCNJ-201ENST00000265992 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
CCNJ-201ENST00000265992 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
CCNJ-201ENST00000265992 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
CCNJ-201ENST00000265992 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
CCNJ-201ENST00000265992 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
CCNJ-201ENST00000265992 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
CCNJ-201ENST00000265992 HRCP23327 699 aa23.04■■□□□ 1.28
CCNJ-201ENST00000265992 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
CCNJ-201ENST00000265992 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
CCNJ-201ENST00000265992 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
CCNJ-201ENST00000265992 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
CCNJ-201ENST00000265992 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
CCNJ-201ENST00000265992 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
CCNJ-201ENST00000265992 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
CCNJ-201ENST00000265992 YTHDC1Q96MU7 727 aaKnown RBP22.27■■□□□ 1.16
CCNJ-201ENST00000265992 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
CCNJ-201ENST00000265992 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
CCNJ-201ENST00000265992 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.13
CCNJ-201ENST00000265992 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
CCNJ-201ENST00000265992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
CCNJ-201ENST00000265992 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
CCNJ-201ENST00000265992 GTF3C3Q9Y5Q9 886 aa21.75■■□□□ 1.07
CCNJ-201ENST00000265992 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
CCNJ-201ENST00000265992 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
CCNJ-201ENST00000265992 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
CCNJ-201ENST00000265992 APLP2Q06481 763 aa21.65■■□□□ 1.06
CCNJ-201ENST00000265992 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
CCNJ-201ENST00000265992 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
CCNJ-201ENST00000265992 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
CCNJ-201ENST00000265992 MYT1Q01538 1121 aa21.36■■□□□ 1.01
CCNJ-201ENST00000265992 ITGAEP38570 1179 aa21.25■□□□□ 0.99
CCNJ-201ENST00000265992 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
CCNJ-201ENST00000265992 BCANQ96GW7 911 aa21.17■□□□□ 0.98
CCNJ-201ENST00000265992 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
CCNJ-201ENST00000265992 ERICH6Q7L0X2 663 aa21.1■□□□□ 0.97
CCNJ-201ENST00000265992 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
CCNJ-201ENST00000265992 NEFLP07196 543 aa21.01■□□□□ 0.95
CCNJ-201ENST00000265992 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.93
CCNJ-201ENST00000265992 MIER1Q8N108 512 aa20.89■□□□□ 0.93
CCNJ-201ENST00000265992 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
CCNJ-201ENST00000265992 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
CCNJ-201ENST00000265992 POLR3GLQ9BT43 218 aa20.56■□□□□ 0.88
CCNJ-201ENST00000265992 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
CCNJ-201ENST00000265992 FKBP8Q14318 412 aa20.54■□□□□ 0.88
CCNJ-201ENST00000265992 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCNJ-201ENST00000265992 FAM50AQ14320 339 aaKnown RBP20.47■□□□□ 0.87
CCNJ-201ENST00000265992 HIRIP3Q9BW71 556 aaPredicted RBP20.46■□□□□ 0.87
CCNJ-201ENST00000265992 ABCC9O60706 1549 aa20.44■□□□□ 0.86
CCNJ-201ENST00000265992 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
CCNJ-201ENST00000265992 DDX10Q13206 875 aaKnown RBP20.42■□□□□ 0.86
CCNJ-201ENST00000265992 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
CCNJ-201ENST00000265992 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
CCNJ-201ENST00000265992 IRX6P78412 446 aaPredicted RBP20.34■□□□□ 0.85
CCNJ-201ENST00000265992 ANP32CO43423 234 aa20.27■□□□□ 0.84
CCNJ-201ENST00000265992 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.83
CCNJ-201ENST00000265992 P3H3Q8IVL6 736 aa20.26■□□□□ 0.83
CCNJ-201ENST00000265992 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
CCNJ-201ENST00000265992 CDK11AQ9UQ88 783 aaPredicted RBP20.2■□□□□ 0.82
CCNJ-201ENST00000265992 ANP32EQ9BTT0 268 aa20.17■□□□□ 0.82
CCNJ-201ENST00000265992 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
CCNJ-201ENST00000265992 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
CCNJ-201ENST00000265992 NBR1Q14596 966 aa20.08■□□□□ 0.81
CCNJ-201ENST00000265992 RTL5Q5HYW3 569 aaPredicted RBP20.08■□□□□ 0.81
CCNJ-201ENST00000265992 BCL11AQ9H165 835 aa20.05■□□□□ 0.8
CCNJ-201ENST00000265992 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
CCNJ-201ENST00000265992 KCNH8Q96L42 1107 aa20.05■□□□□ 0.8
CCNJ-201ENST00000265992 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
CCNJ-201ENST00000265992 TSHZ2Q9NRE2 1034 aa20.02■□□□□ 0.79
CCNJ-201ENST00000265992 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
CCNJ-201ENST00000265992 CECR2Q9BXF3 1484 aa20.01■□□□□ 0.79
CCNJ-201ENST00000265992 FAM9BQ8IZU0 186 aa20■□□□□ 0.79
CCNJ-201ENST00000265992 SOGA1O94964 1423 aa19.99■□□□□ 0.79
CCNJ-201ENST00000265992 NPM2Q86SE8 214 aaKnown RBP19.99■□□□□ 0.79
CCNJ-201ENST00000265992 CLIP1P30622 1438 aa19.97■□□□□ 0.79
CCNJ-201ENST00000265992 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.79
CCNJ-201ENST00000265992 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
CCNJ-201ENST00000265992 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
CCNJ-201ENST00000265992 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
CCNJ-201ENST00000265992 RBM19Q9Y4C8 960 aaKnown RBP19.86■□□□□ 0.77
CCNJ-201ENST00000265992 TNIKQ9UKE5 1360 aa19.85■□□□□ 0.77
CCNJ-201ENST00000265992 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
CCNJ-201ENST00000265992 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
CCNJ-201ENST00000265992 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
CCNJ-201ENST00000265992 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
CCNJ-201ENST00000265992 KANK4Q5T7N3 995 aaPredicted RBP19.77■□□□□ 0.75
CCNJ-201ENST00000265992 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
CCNJ-201ENST00000265992 ANP32AP39687 249 aaKnown RBP19.73■□□□□ 0.75
CCNJ-201ENST00000265992 RTN4Q9NQC3 1192 aaKnown RBP19.72■□□□□ 0.75
CCNJ-201ENST00000265992 EIF5BO60841 1220 aaKnown RBP19.71■□□□□ 0.75
CCNJ-201ENST00000265992 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
CCNJ-201ENST00000265992 MRS2Q9HD23 443 aa19.7■□□□□ 0.74
CCNJ-201ENST00000265992 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
CCNJ-201ENST00000265992 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
CCNJ-201ENST00000265992 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
CCNJ-201ENST00000265992 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
CCNJ-201ENST00000265992 ZBTB47Q9UFB7 747 aaPredicted RBP19.58■□□□□ 0.72
CCNJ-201ENST00000265992 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
CCNJ-201ENST00000265992 ARXQ96QS3 562 aa19.52■□□□□ 0.71
CCNJ-201ENST00000265992 DEKP35659 375 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms