RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 NISCHQ9Y2I1 1504 aa30.51■■■□□ 2.47
ZKSCAN4-201ENST00000377294 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
ZKSCAN4-201ENST00000377294 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
ZKSCAN4-201ENST00000377294 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
ZKSCAN4-201ENST00000377294 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
ZKSCAN4-201ENST00000377294 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
ZKSCAN4-201ENST00000377294 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
ZKSCAN4-201ENST00000377294 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
ZKSCAN4-201ENST00000377294 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
ZKSCAN4-201ENST00000377294 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
ZKSCAN4-201ENST00000377294 ABCC9O60706 1549 aa24.34■■□□□ 1.49
ZKSCAN4-201ENST00000377294 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
ZKSCAN4-201ENST00000377294 LOC105371045A0A1W2PR82 267 aa24.06■■□□□ 1.44
ZKSCAN4-201ENST00000377294 NACADO15069 1562 aa23.98■■□□□ 1.43
ZKSCAN4-201ENST00000377294 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.43
ZKSCAN4-201ENST00000377294 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
ZKSCAN4-201ENST00000377294 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
ZKSCAN4-201ENST00000377294 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
ZKSCAN4-201ENST00000377294 WIZO95785 1651 aa23.7■■□□□ 1.38
ZKSCAN4-201ENST00000377294 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
ZKSCAN4-201ENST00000377294 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
ZKSCAN4-201ENST00000377294 HRCP23327 699 aa23.65■■□□□ 1.38
ZKSCAN4-201ENST00000377294 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
ZKSCAN4-201ENST00000377294 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
ZKSCAN4-201ENST00000377294 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
ZKSCAN4-201ENST00000377294 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
ZKSCAN4-201ENST00000377294 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
ZKSCAN4-201ENST00000377294 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
ZKSCAN4-201ENST00000377294 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
ZKSCAN4-201ENST00000377294 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
ZKSCAN4-201ENST00000377294 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.31
ZKSCAN4-201ENST00000377294 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
ZKSCAN4-201ENST00000377294 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
ZKSCAN4-201ENST00000377294 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
ZKSCAN4-201ENST00000377294 BICRAQ9NZM4 1560 aa23.13■■□□□ 1.29
ZKSCAN4-201ENST00000377294 SOGA1O94964 1423 aa22.89■■□□□ 1.25
ZKSCAN4-201ENST00000377294 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.24
ZKSCAN4-201ENST00000377294 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
ZKSCAN4-201ENST00000377294 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
ZKSCAN4-201ENST00000377294 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
ZKSCAN4-201ENST00000377294 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
ZKSCAN4-201ENST00000377294 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
ZKSCAN4-201ENST00000377294 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
ZKSCAN4-201ENST00000377294 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
ZKSCAN4-201ENST00000377294 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
ZKSCAN4-201ENST00000377294 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
ZKSCAN4-201ENST00000377294 ZEB1P37275 1124 aaPredicted RBP22.57■■□□□ 1.2
ZKSCAN4-201ENST00000377294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
ZKSCAN4-201ENST00000377294 TNIKQ9UKE5 1360 aa22.55■■□□□ 1.2
ZKSCAN4-201ENST00000377294 EEA1Q15075 1411 aa22.5■■□□□ 1.19
ZKSCAN4-201ENST00000377294 GOLGA3Q08378 1498 aa22.46■■□□□ 1.19
ZKSCAN4-201ENST00000377294 RANGAP1P46060 587 aaPredicted RBP22.39■■□□□ 1.18
ZKSCAN4-201ENST00000377294 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
ZKSCAN4-201ENST00000377294 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.17
ZKSCAN4-201ENST00000377294 RAPGEF2Q9Y4G8 1499 aa22.31■■□□□ 1.16
ZKSCAN4-201ENST00000377294 KIF21BO75037 1637 aa22.3■■□□□ 1.16
ZKSCAN4-201ENST00000377294 TOP2BQ02880 1626 aa22.27■■□□□ 1.15
ZKSCAN4-201ENST00000377294 CLIP1P30622 1438 aa22.24■■□□□ 1.15
ZKSCAN4-201ENST00000377294 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
ZKSCAN4-201ENST00000377294 HMGXB3Q12766 1538 aa22.2■■□□□ 1.15
ZKSCAN4-201ENST00000377294 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
ZKSCAN4-201ENST00000377294 CUX1P39880 1505 aa22.15■■□□□ 1.14
ZKSCAN4-201ENST00000377294 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
ZKSCAN4-201ENST00000377294 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
ZKSCAN4-201ENST00000377294 CFTRP13569 1480 aa22.05■■□□□ 1.12
ZKSCAN4-201ENST00000377294 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
ZKSCAN4-201ENST00000377294 APLP2Q06481 763 aa21.98■■□□□ 1.11
ZKSCAN4-201ENST00000377294 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
ZKSCAN4-201ENST00000377294 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
ZKSCAN4-201ENST00000377294 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
ZKSCAN4-201ENST00000377294 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
ZKSCAN4-201ENST00000377294 CC2D2AQ9P2K1 1620 aa21.86■■□□□ 1.09
ZKSCAN4-201ENST00000377294 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
ZKSCAN4-201ENST00000377294 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
ZKSCAN4-201ENST00000377294 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.09
ZKSCAN4-201ENST00000377294 CUX2O14529 1486 aa21.83■■□□□ 1.08
ZKSCAN4-201ENST00000377294 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
ZKSCAN4-201ENST00000377294 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
ZKSCAN4-201ENST00000377294 ARHGAP35Q9NRY4 1499 aa21.76■■□□□ 1.07
ZKSCAN4-201ENST00000377294 IGF1RP08069 1367 aa21.75■■□□□ 1.07
ZKSCAN4-201ENST00000377294 NESP48681 1621 aa21.69■■□□□ 1.06
ZKSCAN4-201ENST00000377294 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
ZKSCAN4-201ENST00000377294 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
ZKSCAN4-201ENST00000377294 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
ZKSCAN4-201ENST00000377294 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.05
ZKSCAN4-201ENST00000377294 NEUROD1Q13562 356 aa21.63■■□□□ 1.05
ZKSCAN4-201ENST00000377294 ITGAEP38570 1179 aa21.62■■□□□ 1.05
ZKSCAN4-201ENST00000377294 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
ZKSCAN4-201ENST00000377294 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
ZKSCAN4-201ENST00000377294 DHX57Q6P158 1386 aaKnown RBP21.55■■□□□ 1.04
ZKSCAN4-201ENST00000377294 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
ZKSCAN4-201ENST00000377294 RRBP1Q9P2E9 1410 aaKnown RBP21.54■■□□□ 1.04
ZKSCAN4-201ENST00000377294 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
ZKSCAN4-201ENST00000377294 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
ZKSCAN4-201ENST00000377294 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
ZKSCAN4-201ENST00000377294 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
ZKSCAN4-201ENST00000377294 ATP1B4Q9UN42 357 aaPredicted RBP21.5■■□□□ 1.03
ZKSCAN4-201ENST00000377294 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
ZKSCAN4-201ENST00000377294 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
ZKSCAN4-201ENST00000377294 MIER1Q8N108 512 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms