RNA–Protein interactions for RNA: ENST00000396735.6

PPM1N-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best) BASIC

Gene PPM1N, Length 895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-201ENST00000396735 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
PPM1N-201ENST00000396735 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
PPM1N-201ENST00000396735 ABCC9O60706 1549 aa30.24■■■□□ 2.43
PPM1N-201ENST00000396735 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
PPM1N-201ENST00000396735 NACADO15069 1562 aa28.71■■■□□ 2.19
PPM1N-201ENST00000396735 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
PPM1N-201ENST00000396735 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
PPM1N-201ENST00000396735 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
PPM1N-201ENST00000396735 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
PPM1N-201ENST00000396735 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
PPM1N-201ENST00000396735 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
PPM1N-201ENST00000396735 DNAJC5BQ9UF47 199 aa28.13■■■□□ 2.09
PPM1N-201ENST00000396735 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
PPM1N-201ENST00000396735 SCRIBQ14160 1630 aa27.88■■■□□ 2.05
PPM1N-201ENST00000396735 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
PPM1N-201ENST00000396735 EIF4G1Q04637 1599 aaKnown RBP27.33■■□□□ 1.97
PPM1N-201ENST00000396735 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
PPM1N-201ENST00000396735 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PPM1N-201ENST00000396735 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
PPM1N-201ENST00000396735 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
PPM1N-201ENST00000396735 ATAD2BQ9ULI0 1458 aa26.5■■□□□ 1.83
PPM1N-201ENST00000396735 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
PPM1N-201ENST00000396735 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
PPM1N-201ENST00000396735 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
PPM1N-201ENST00000396735 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
PPM1N-201ENST00000396735 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
PPM1N-201ENST00000396735 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
PPM1N-201ENST00000396735 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
PPM1N-201ENST00000396735 NESP48681 1621 aa26.11■■□□□ 1.77
PPM1N-201ENST00000396735 WIZO95785 1651 aa26.09■■□□□ 1.77
PPM1N-201ENST00000396735 ERCC6Q03468 1493 aa26■■□□□ 1.75
PPM1N-201ENST00000396735 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
PPM1N-201ENST00000396735 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
PPM1N-201ENST00000396735 CUX2O14529 1486 aa25.83■■□□□ 1.73
PPM1N-201ENST00000396735 KIF21AQ7Z4S6 1674 aa25.79■■□□□ 1.72
PPM1N-201ENST00000396735 THOC2Q8NI27 1593 aaKnown RBP25.76■■□□□ 1.71
PPM1N-201ENST00000396735 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
PPM1N-201ENST00000396735 TOP2AP11388 1531 aaKnown RBP25.7■■□□□ 1.7
PPM1N-201ENST00000396735 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
PPM1N-201ENST00000396735 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
PPM1N-201ENST00000396735 CFTRP13569 1480 aa25.5■■□□□ 1.67
PPM1N-201ENST00000396735 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
PPM1N-201ENST00000396735 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
PPM1N-201ENST00000396735 FANCD2Q9BXW9 1451 aa25.45■■□□□ 1.66
PPM1N-201ENST00000396735 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
PPM1N-201ENST00000396735 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
PPM1N-201ENST00000396735 WDR62O43379 1518 aa25.42■■□□□ 1.66
PPM1N-201ENST00000396735 PRDM2Q13029 1718 aa25.33■■□□□ 1.65
PPM1N-201ENST00000396735 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
PPM1N-201ENST00000396735 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
PPM1N-201ENST00000396735 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
PPM1N-201ENST00000396735 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
PPM1N-201ENST00000396735 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
PPM1N-201ENST00000396735 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
PPM1N-201ENST00000396735 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
PPM1N-201ENST00000396735 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
PPM1N-201ENST00000396735 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
PPM1N-201ENST00000396735 POLA1P09884 1462 aaPredicted RBP24.79■■□□□ 1.56
PPM1N-201ENST00000396735 CUX1P39880 1505 aa24.75■■□□□ 1.55
PPM1N-201ENST00000396735 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
PPM1N-201ENST00000396735 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.552e-7■■■■■ 32.8
PPM1N-201ENST00000396735 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
PPM1N-201ENST00000396735 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
PPM1N-201ENST00000396735 SOGA1O94964 1423 aa24.64■■□□□ 1.54
PPM1N-201ENST00000396735 TDRD9Q8NDG6 1382 aaKnown RBP24.6■■□□□ 1.53
PPM1N-201ENST00000396735 CHD1O14646 1710 aa24.58■■□□□ 1.52
PPM1N-201ENST00000396735 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
PPM1N-201ENST00000396735 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
PPM1N-201ENST00000396735 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
PPM1N-201ENST00000396735 FBLN2P98095 1184 aa24.42■■□□□ 1.5
PPM1N-201ENST00000396735 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
PPM1N-201ENST00000396735 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
PPM1N-201ENST00000396735 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
PPM1N-201ENST00000396735 ABCA10Q8WWZ4 1543 aa24.39■■□□□ 1.49
PPM1N-201ENST00000396735 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
PPM1N-201ENST00000396735 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
PPM1N-201ENST00000396735 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
PPM1N-201ENST00000396735 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
PPM1N-201ENST00000396735 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
PPM1N-201ENST00000396735 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
PPM1N-201ENST00000396735 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
PPM1N-201ENST00000396735 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
PPM1N-201ENST00000396735 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
PPM1N-201ENST00000396735 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
PPM1N-201ENST00000396735 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
PPM1N-201ENST00000396735 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
PPM1N-201ENST00000396735 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
PPM1N-201ENST00000396735 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
PPM1N-201ENST00000396735 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
PPM1N-201ENST00000396735 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
PPM1N-201ENST00000396735 NUP160Q12769 1436 aa24■■□□□ 1.43
PPM1N-201ENST00000396735 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
PPM1N-201ENST00000396735 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
PPM1N-201ENST00000396735 IGF1RP08069 1367 aa23.86■■□□□ 1.41
PPM1N-201ENST00000396735 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
PPM1N-201ENST00000396735 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms