RNA–Protein interactions for RNA: ENST00000396735.6

PPM1N-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best) BASIC

Gene PPM1N, Length 895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-201ENST00000396735 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
PPM1N-201ENST00000396735 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
PPM1N-201ENST00000396735 ABCC9O60706 1549 aa30.24■■■□□ 2.43
PPM1N-201ENST00000396735 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
PPM1N-201ENST00000396735 NACADO15069 1562 aa28.71■■■□□ 2.19
PPM1N-201ENST00000396735 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
PPM1N-201ENST00000396735 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
PPM1N-201ENST00000396735 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
PPM1N-201ENST00000396735 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
PPM1N-201ENST00000396735 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
PPM1N-201ENST00000396735 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
PPM1N-201ENST00000396735 DNAJC5BQ9UF47 199 aa28.13■■■□□ 2.09
PPM1N-201ENST00000396735 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
PPM1N-201ENST00000396735 SCRIBQ14160 1630 aa27.88■■■□□ 2.05
PPM1N-201ENST00000396735 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
PPM1N-201ENST00000396735 EIF4G1Q04637 1599 aaKnown RBP27.33■■□□□ 1.97
PPM1N-201ENST00000396735 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
PPM1N-201ENST00000396735 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PPM1N-201ENST00000396735 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
PPM1N-201ENST00000396735 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
PPM1N-201ENST00000396735 ATAD2BQ9ULI0 1458 aa26.5■■□□□ 1.83
PPM1N-201ENST00000396735 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
PPM1N-201ENST00000396735 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
PPM1N-201ENST00000396735 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
PPM1N-201ENST00000396735 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
PPM1N-201ENST00000396735 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
PPM1N-201ENST00000396735 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
PPM1N-201ENST00000396735 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
PPM1N-201ENST00000396735 NESP48681 1621 aa26.11■■□□□ 1.77
PPM1N-201ENST00000396735 WIZO95785 1651 aa26.09■■□□□ 1.77
PPM1N-201ENST00000396735 ERCC6Q03468 1493 aa26■■□□□ 1.75
PPM1N-201ENST00000396735 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
PPM1N-201ENST00000396735 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
PPM1N-201ENST00000396735 CUX2O14529 1486 aa25.83■■□□□ 1.73
PPM1N-201ENST00000396735 KIF21AQ7Z4S6 1674 aa25.79■■□□□ 1.72
PPM1N-201ENST00000396735 THOC2Q8NI27 1593 aaKnown RBP25.76■■□□□ 1.71
PPM1N-201ENST00000396735 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
PPM1N-201ENST00000396735 TOP2AP11388 1531 aaKnown RBP25.7■■□□□ 1.7
PPM1N-201ENST00000396735 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
PPM1N-201ENST00000396735 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
PPM1N-201ENST00000396735 CFTRP13569 1480 aa25.5■■□□□ 1.67
PPM1N-201ENST00000396735 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
PPM1N-201ENST00000396735 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
PPM1N-201ENST00000396735 FANCD2Q9BXW9 1451 aa25.45■■□□□ 1.66
PPM1N-201ENST00000396735 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
PPM1N-201ENST00000396735 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
PPM1N-201ENST00000396735 WDR62O43379 1518 aa25.42■■□□□ 1.66
PPM1N-201ENST00000396735 PRDM2Q13029 1718 aa25.33■■□□□ 1.65
PPM1N-201ENST00000396735 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
PPM1N-201ENST00000396735 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
PPM1N-201ENST00000396735 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
PPM1N-201ENST00000396735 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
PPM1N-201ENST00000396735 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
PPM1N-201ENST00000396735 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
PPM1N-201ENST00000396735 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
PPM1N-201ENST00000396735 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
PPM1N-201ENST00000396735 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
PPM1N-201ENST00000396735 POLA1P09884 1462 aaPredicted RBP24.79■■□□□ 1.56
PPM1N-201ENST00000396735 CUX1P39880 1505 aa24.75■■□□□ 1.55
PPM1N-201ENST00000396735 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
PPM1N-201ENST00000396735 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.552e-7■■■■■ 32.8
PPM1N-201ENST00000396735 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
PPM1N-201ENST00000396735 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
PPM1N-201ENST00000396735 SOGA1O94964 1423 aa24.64■■□□□ 1.54
PPM1N-201ENST00000396735 TDRD9Q8NDG6 1382 aaKnown RBP24.6■■□□□ 1.53
PPM1N-201ENST00000396735 CHD1O14646 1710 aa24.58■■□□□ 1.52
PPM1N-201ENST00000396735 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
PPM1N-201ENST00000396735 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
PPM1N-201ENST00000396735 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
PPM1N-201ENST00000396735 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
PPM1N-201ENST00000396735 FBLN2P98095 1184 aa24.42■■□□□ 1.5
PPM1N-201ENST00000396735 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
PPM1N-201ENST00000396735 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
PPM1N-201ENST00000396735 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
PPM1N-201ENST00000396735 ABCA10Q8WWZ4 1543 aa24.39■■□□□ 1.49
PPM1N-201ENST00000396735 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
PPM1N-201ENST00000396735 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
PPM1N-201ENST00000396735 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
PPM1N-201ENST00000396735 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
PPM1N-201ENST00000396735 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
PPM1N-201ENST00000396735 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
PPM1N-201ENST00000396735 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
PPM1N-201ENST00000396735 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
PPM1N-201ENST00000396735 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
PPM1N-201ENST00000396735 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
PPM1N-201ENST00000396735 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
PPM1N-201ENST00000396735 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
PPM1N-201ENST00000396735 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
PPM1N-201ENST00000396735 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
PPM1N-201ENST00000396735 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
PPM1N-201ENST00000396735 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
PPM1N-201ENST00000396735 NUP160Q12769 1436 aa24■■□□□ 1.43
PPM1N-201ENST00000396735 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
PPM1N-201ENST00000396735 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
PPM1N-201ENST00000396735 IGF1RP08069 1367 aa23.86■■□□□ 1.41
PPM1N-201ENST00000396735 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
PPM1N-201ENST00000396735 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms