RNA–Protein interactions for RNA: ENST00000268719.8

GID4-201, Transcript of GID complex subunit 4 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GID4, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GID4-201ENST00000268719 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
GID4-201ENST00000268719 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
GID4-201ENST00000268719 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
GID4-201ENST00000268719 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
GID4-201ENST00000268719 PCGF6Q9BYE7 350 aa23.19■■□□□ 1.3
GID4-201ENST00000268719 EHMT2Q96KQ7 1210 aa22.75■■□□□ 1.23
GID4-201ENST00000268719 HRCP23327 699 aa22.72■■□□□ 1.23
GID4-201ENST00000268719 PPARGC1BQ86YN6 1023 aaKnown RBP22.47■■□□□ 1.19
GID4-201ENST00000268719 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
GID4-201ENST00000268719 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.17
GID4-201ENST00000268719 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
GID4-201ENST00000268719 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
GID4-201ENST00000268719 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.13
GID4-201ENST00000268719 TRIM26Q12899 539 aaPredicted RBP22.1■■□□□ 1.13
GID4-201ENST00000268719 TTBK1Q5TCY1 1321 aaPredicted RBP22.08■■□□□ 1.12
GID4-201ENST00000268719 CENPBP07199 599 aaPredicted RBP22.04■■□□□ 1.12
GID4-201ENST00000268719 CCER1Q8TC90 406 aaPredicted RBP22■■□□□ 1.11
GID4-201ENST00000268719 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
GID4-201ENST00000268719 YTHDC1Q96MU7 727 aaKnown RBP21.76■■□□□ 1.07
GID4-201ENST00000268719 MYT1Q01538 1121 aa21.75■■□□□ 1.07
GID4-201ENST00000268719 APLP2Q06481 763 aa21.55■■□□□ 1.04
GID4-201ENST00000268719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
GID4-201ENST00000268719 DIEXFQ68CQ4 756 aaKnown RBP21.38■■□□□ 1.01
GID4-201ENST00000268719 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
GID4-201ENST00000268719 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
GID4-201ENST00000268719 UBTFP17480 764 aaKnown RBP21.33■■□□□ 1.01
GID4-201ENST00000268719 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
GID4-201ENST00000268719 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
GID4-201ENST00000268719 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
GID4-201ENST00000268719 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
GID4-201ENST00000268719 ERICH6Q7L0X2 663 aa21.05■□□□□ 0.96
GID4-201ENST00000268719 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
GID4-201ENST00000268719 NEUROD1Q13562 356 aa21.02■□□□□ 0.95
GID4-201ENST00000268719 NEFLP07196 543 aa20.96■□□□□ 0.95
GID4-201ENST00000268719 ZNF316A6NFI3 1004 aaPredicted RBP20.84■□□□□ 0.93
GID4-201ENST00000268719 ITGAEP38570 1179 aa20.75■□□□□ 0.91
GID4-201ENST00000268719 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
GID4-201ENST00000268719 BCANQ96GW7 911 aa20.67■□□□□ 0.9
GID4-201ENST00000268719 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.89
GID4-201ENST00000268719 MIER1Q8N108 512 aa20.47■□□□□ 0.87
GID4-201ENST00000268719 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
GID4-201ENST00000268719 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
GID4-201ENST00000268719 CNGB1Q14028 1251 aaPredicted RBP20.26■□□□□ 0.83
GID4-201ENST00000268719 FKBP8Q14318 412 aa20.22■□□□□ 0.83
GID4-201ENST00000268719 POLR3GLQ9BT43 218 aa20.14■□□□□ 0.81
GID4-201ENST00000268719 ANP32CO43423 234 aa20.13■□□□□ 0.81
GID4-201ENST00000268719 FAM50AQ14320 339 aaKnown RBP20.13■□□□□ 0.81
GID4-201ENST00000268719 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
GID4-201ENST00000268719 CDK11AQ9UQ88 783 aaPredicted RBP20.12■□□□□ 0.81
GID4-201ENST00000268719 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
GID4-201ENST00000268719 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
GID4-201ENST00000268719 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.8
GID4-201ENST00000268719 ANP32EQ9BTT0 268 aa20.01■□□□□ 0.79
GID4-201ENST00000268719 TRIM52Q96A61 297 aa19.98■□□□□ 0.79
GID4-201ENST00000268719 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
GID4-201ENST00000268719 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
GID4-201ENST00000268719 ABCC9O60706 1549 aa19.93■□□□□ 0.78
GID4-201ENST00000268719 DAXXQ9UER7 740 aaPredicted RBP19.92■□□□□ 0.78
GID4-201ENST00000268719 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
GID4-201ENST00000268719 CEP162Q5TB80 1403 aa19.88■□□□□ 0.77
GID4-201ENST00000268719 HIRIP3Q9BW71 556 aaPredicted RBP19.84■□□□□ 0.77
GID4-201ENST00000268719 HNRNPUQ00839 825 aaKnown RBP eCLIP19.82■□□□□ 0.76
GID4-201ENST00000268719 IRX6P78412 446 aaPredicted RBP19.81■□□□□ 0.76
GID4-201ENST00000268719 BCL11AQ9H165 835 aa19.76■□□□□ 0.75
GID4-201ENST00000268719 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
GID4-201ENST00000268719 NBR1Q14596 966 aa19.7■□□□□ 0.74
GID4-201ENST00000268719 CLIP1P30622 1438 aa19.7■□□□□ 0.74
GID4-201ENST00000268719 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
GID4-201ENST00000268719 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
GID4-201ENST00000268719 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
GID4-201ENST00000268719 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
GID4-201ENST00000268719 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
GID4-201ENST00000268719 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
GID4-201ENST00000268719 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
GID4-201ENST00000268719 RBM19Q9Y4C8 960 aaKnown RBP19.58■□□□□ 0.72
GID4-201ENST00000268719 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
GID4-201ENST00000268719 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
GID4-201ENST00000268719 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
GID4-201ENST00000268719 SOGA1O94964 1423 aa19.53■□□□□ 0.72
GID4-201ENST00000268719 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
GID4-201ENST00000268719 SIN3AQ96ST3 1273 aa19.49■□□□□ 0.71
GID4-201ENST00000268719 EEA1Q15075 1411 aa19.49■□□□□ 0.71
GID4-201ENST00000268719 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
GID4-201ENST00000268719 CCDC136Q96JN2 1154 aa19.47■□□□□ 0.71
GID4-201ENST00000268719 EIF5BO60841 1220 aaKnown RBP19.46■□□□□ 0.71
GID4-201ENST00000268719 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
GID4-201ENST00000268719 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
GID4-201ENST00000268719 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
GID4-201ENST00000268719 ARID3CA6NKF2 412 aa19.38■□□□□ 0.69
GID4-201ENST00000268719 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
GID4-201ENST00000268719 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
GID4-201ENST00000268719 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
GID4-201ENST00000268719 CHIC2Q9UKJ5 165 aa19.33■□□□□ 0.69
GID4-201ENST00000268719 B4GALNT3Q6L9W6 998 aa19.32■□□□□ 0.68
GID4-201ENST00000268719 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
GID4-201ENST00000268719 KANK4Q5T7N3 995 aaPredicted RBP19.3■□□□□ 0.68
GID4-201ENST00000268719 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
GID4-201ENST00000268719 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
GID4-201ENST00000268719 DEKP35659 375 aaKnown RBP19.28■□□□□ 0.68
GID4-201ENST00000268719 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms