RNA–Protein interactions for RNA: ENST00000584701.1

RBP3-201, Transcript of retinol binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBP3, Length 4,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBP3-201ENST00000584701 NISCHQ9Y2I1 1504 aa25.19■■□□□ 1.62
RBP3-201ENST00000584701 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.46
RBP3-201ENST00000584701 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
RBP3-201ENST00000584701 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
RBP3-201ENST00000584701 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
RBP3-201ENST00000584701 PCGF6Q9BYE7 350 aa21.5■■□□□ 1.03
RBP3-201ENST00000584701 FAM9AQ8IZU1 332 aaPredicted RBP21.48■■□□□ 1.03
RBP3-201ENST00000584701 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
RBP3-201ENST00000584701 APLP2Q06481 763 aa21.19■□□□□ 0.98
RBP3-201ENST00000584701 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
RBP3-201ENST00000584701 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
RBP3-201ENST00000584701 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
RBP3-201ENST00000584701 HRCP23327 699 aa21.03■□□□□ 0.96
RBP3-201ENST00000584701 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
RBP3-201ENST00000584701 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
RBP3-201ENST00000584701 CCDC180Q9P1Z9 1646 aa20.87■□□□□ 0.93
RBP3-201ENST00000584701 ABCC9O60706 1549 aa20.84■□□□□ 0.93
RBP3-201ENST00000584701 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
RBP3-201ENST00000584701 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
RBP3-201ENST00000584701 TRIM26Q12899 539 aaPredicted RBP20.74■□□□□ 0.91
RBP3-201ENST00000584701 ATP1B4Q9UN42 357 aaPredicted RBP20.7■□□□□ 0.9
RBP3-201ENST00000584701 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
RBP3-201ENST00000584701 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
RBP3-201ENST00000584701 ZEB1P37275 1124 aaPredicted RBP20.55■□□□□ 0.88
RBP3-201ENST00000584701 CCER1Q8TC90 406 aaPredicted RBP20.42■□□□□ 0.86
RBP3-201ENST00000584701 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
RBP3-201ENST00000584701 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
RBP3-201ENST00000584701 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
RBP3-201ENST00000584701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.81
RBP3-201ENST00000584701 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
RBP3-201ENST00000584701 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.8
RBP3-201ENST00000584701 ITGAEP38570 1179 aa20.04■□□□□ 0.8
RBP3-201ENST00000584701 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
RBP3-201ENST00000584701 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
RBP3-201ENST00000584701 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
RBP3-201ENST00000584701 MYT1LQ9UL68 1186 aa19.81■□□□□ 0.76
RBP3-201ENST00000584701 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
RBP3-201ENST00000584701 DIEXFQ68CQ4 756 aaKnown RBP19.76■□□□□ 0.75
RBP3-201ENST00000584701 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
RBP3-201ENST00000584701 NACADO15069 1562 aa19.72■□□□□ 0.75
RBP3-201ENST00000584701 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
RBP3-201ENST00000584701 FBLN2P98095 1184 aa19.65■□□□□ 0.74
RBP3-201ENST00000584701 MYT1Q01538 1121 aa19.6■□□□□ 0.73
RBP3-201ENST00000584701 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
RBP3-201ENST00000584701 POLR3GLQ9BT43 218 aa19.52■□□□□ 0.71
RBP3-201ENST00000584701 P3H3Q8IVL6 736 aa19.49■□□□□ 0.71
RBP3-201ENST00000584701 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
RBP3-201ENST00000584701 WIZO95785 1651 aa19.47■□□□□ 0.71
RBP3-201ENST00000584701 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
RBP3-201ENST00000584701 GTF3C3Q9Y5Q9 886 aa19.44■□□□□ 0.7
RBP3-201ENST00000584701 ZNF316A6NFI3 1004 aaPredicted RBP19.43■□□□□ 0.7
RBP3-201ENST00000584701 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
RBP3-201ENST00000584701 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
RBP3-201ENST00000584701 NEFLP07196 543 aa19.39■□□□□ 0.69
RBP3-201ENST00000584701 ARID3CA6NKF2 412 aa19.38■□□□□ 0.69
RBP3-201ENST00000584701 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
RBP3-201ENST00000584701 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
RBP3-201ENST00000584701 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
RBP3-201ENST00000584701 SOGA1O94964 1423 aa19.37■□□□□ 0.69
RBP3-201ENST00000584701 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.69
RBP3-201ENST00000584701 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
RBP3-201ENST00000584701 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
RBP3-201ENST00000584701 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
RBP3-201ENST00000584701 EEA1Q15075 1411 aa19.27■□□□□ 0.68
RBP3-201ENST00000584701 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
RBP3-201ENST00000584701 CLIP1P30622 1438 aa19.25■□□□□ 0.67
RBP3-201ENST00000584701 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
RBP3-201ENST00000584701 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
RBP3-201ENST00000584701 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
RBP3-201ENST00000584701 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
RBP3-201ENST00000584701 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
RBP3-201ENST00000584701 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
RBP3-201ENST00000584701 ERICH6Q7L0X2 663 aa19.1■□□□□ 0.65
RBP3-201ENST00000584701 CEP164Q9UPV0 1460 aa19.1■□□□□ 0.65
RBP3-201ENST00000584701 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
RBP3-201ENST00000584701 MIER1Q8N108 512 aa19.08■□□□□ 0.65
RBP3-201ENST00000584701 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
RBP3-201ENST00000584701 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
RBP3-201ENST00000584701 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
RBP3-201ENST00000584701 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
RBP3-201ENST00000584701 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
RBP3-201ENST00000584701 CHIC2Q9UKJ5 165 aa18.83■□□□□ 0.61
RBP3-201ENST00000584701 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
RBP3-201ENST00000584701 BCANQ96GW7 911 aa18.83■□□□□ 0.6
RBP3-201ENST00000584701 RAPGEF2Q9Y4G8 1499 aa18.82■□□□□ 0.6
RBP3-201ENST00000584701 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
RBP3-201ENST00000584701 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
RBP3-201ENST00000584701 ANP32CO43423 234 aa18.81■□□□□ 0.6
RBP3-201ENST00000584701 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
RBP3-201ENST00000584701 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.59
RBP3-201ENST00000584701 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
RBP3-201ENST00000584701 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
RBP3-201ENST00000584701 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
RBP3-201ENST00000584701 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
RBP3-201ENST00000584701 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
RBP3-201ENST00000584701 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
RBP3-201ENST00000584701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
RBP3-201ENST00000584701 CCNB3Q8WWL7 1395 aa18.66■□□□□ 0.58
RBP3-201ENST00000584701 CLSPNQ9HAW4 1339 aa18.65■□□□□ 0.58
RBP3-201ENST00000584701 CUX2O14529 1486 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms