RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
MECP2-217ENST00000628176 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
MECP2-217ENST00000628176 ABCC9O60706 1549 aa27.83■■■□□ 2.05
MECP2-217ENST00000628176 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
MECP2-217ENST00000628176 ZCCHC6Q5VYS8 1495 aaKnown RBP27.24■■□□□ 1.95
MECP2-217ENST00000628176 DCAF1Q9Y4B6 1507 aa26.86■■□□□ 1.89
MECP2-217ENST00000628176 NACADO15069 1562 aa26.85■■□□□ 1.89
MECP2-217ENST00000628176 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
MECP2-217ENST00000628176 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
MECP2-217ENST00000628176 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
MECP2-217ENST00000628176 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
MECP2-217ENST00000628176 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
MECP2-217ENST00000628176 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
MECP2-217ENST00000628176 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.76
MECP2-217ENST00000628176 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
MECP2-217ENST00000628176 EIF4G1Q04637 1599 aaKnown RBP25.32■■□□□ 1.64
MECP2-217ENST00000628176 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
MECP2-217ENST00000628176 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
MECP2-217ENST00000628176 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
MECP2-217ENST00000628176 BAZ1AQ9NRL2 1556 aaPredicted RBP25.19■■□□□ 1.62
MECP2-217ENST00000628176 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
MECP2-217ENST00000628176 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
MECP2-217ENST00000628176 WIZO95785 1651 aa25■■□□□ 1.59
MECP2-217ENST00000628176 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
MECP2-217ENST00000628176 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
MECP2-217ENST00000628176 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
MECP2-217ENST00000628176 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
MECP2-217ENST00000628176 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
MECP2-217ENST00000628176 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
MECP2-217ENST00000628176 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
MECP2-217ENST00000628176 TOP2AP11388 1531 aaKnown RBP24.64■■□□□ 1.53
MECP2-217ENST00000628176 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
MECP2-217ENST00000628176 NESP48681 1621 aa24.25■■□□□ 1.47
MECP2-217ENST00000628176 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
MECP2-217ENST00000628176 CFTRP13569 1480 aa24.09■■□□□ 1.45
MECP2-217ENST00000628176 LAMC3Q9Y6N6 1575 aa24.06■■□□□ 1.44
MECP2-217ENST00000628176 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
MECP2-217ENST00000628176 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
MECP2-217ENST00000628176 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
MECP2-217ENST00000628176 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.42
MECP2-217ENST00000628176 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
MECP2-217ENST00000628176 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
MECP2-217ENST00000628176 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
MECP2-217ENST00000628176 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
MECP2-217ENST00000628176 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
MECP2-217ENST00000628176 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
MECP2-217ENST00000628176 CUX1P39880 1505 aa23.61■■□□□ 1.37
MECP2-217ENST00000628176 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
MECP2-217ENST00000628176 TOPBP1Q92547 1522 aa23.58■■□□□ 1.37
MECP2-217ENST00000628176 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
MECP2-217ENST00000628176 WDR62O43379 1518 aa23.55■■□□□ 1.36
MECP2-217ENST00000628176 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
MECP2-217ENST00000628176 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
MECP2-217ENST00000628176 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
MECP2-217ENST00000628176 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.34
MECP2-217ENST00000628176 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
MECP2-217ENST00000628176 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
MECP2-217ENST00000628176 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
MECP2-217ENST00000628176 CUX2O14529 1486 aa23.4■■□□□ 1.34
MECP2-217ENST00000628176 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
MECP2-217ENST00000628176 SOGA1O94964 1423 aa23.33■■□□□ 1.32
MECP2-217ENST00000628176 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
MECP2-217ENST00000628176 ZNF608Q9ULD9 1512 aaPredicted RBP23.25■■□□□ 1.31
MECP2-217ENST00000628176 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
MECP2-217ENST00000628176 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
MECP2-217ENST00000628176 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
MECP2-217ENST00000628176 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.3
MECP2-217ENST00000628176 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
MECP2-217ENST00000628176 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
MECP2-217ENST00000628176 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
MECP2-217ENST00000628176 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
MECP2-217ENST00000628176 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
MECP2-217ENST00000628176 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
MECP2-217ENST00000628176 KIF27Q86VH2 1401 aa23.03■■□□□ 1.28
MECP2-217ENST00000628176 PBRM1Q86U86 1689 aa22.99■■□□□ 1.27
MECP2-217ENST00000628176 DNAJC5Q9H3Z4 198 aa22.96■■□□□ 1.27
MECP2-217ENST00000628176 IGF1RP08069 1367 aa22.95■■□□□ 1.26
MECP2-217ENST00000628176 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
MECP2-217ENST00000628176 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
MECP2-217ENST00000628176 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
MECP2-217ENST00000628176 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
MECP2-217ENST00000628176 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
MECP2-217ENST00000628176 EEA1Q15075 1411 aa22.86■■□□□ 1.25
MECP2-217ENST00000628176 HRCP23327 699 aa22.85■■□□□ 1.25
MECP2-217ENST00000628176 FBLN2P98095 1184 aa22.85■■□□□ 1.25
MECP2-217ENST00000628176 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
MECP2-217ENST00000628176 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
MECP2-217ENST00000628176 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
MECP2-217ENST00000628176 CHMP7Q8WUX9 453 aaPredicted RBP22.77■■□□□ 1.23
MECP2-217ENST00000628176 CHD1O14646 1710 aa22.76■■□□□ 1.23
MECP2-217ENST00000628176 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
MECP2-217ENST00000628176 CUL7Q14999 1698 aa22.75■■□□□ 1.23
MECP2-217ENST00000628176 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
MECP2-217ENST00000628176 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
MECP2-217ENST00000628176 RAPGEF2Q9Y4G8 1499 aa22.71■■□□□ 1.23
MECP2-217ENST00000628176 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
MECP2-217ENST00000628176 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
MECP2-217ENST00000628176 KIF21BO75037 1637 aa22.62■■□□□ 1.21
MECP2-217ENST00000628176 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
MECP2-217ENST00000628176 PCGF6Q9BYE7 350 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms