Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN22Q8N7P3 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 ATP5G2P4-201ENST00000442175 420 ntBASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC104982.3-201ENST00000581995 514 ntBASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC007663.3-201ENST00000609632 465 ntBASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC015819.3-201ENST00000624305 2674 ntBASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC008040.5-201ENST00000599781 1781 ntBASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN22Q8N7P3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 AP001972.5-201ENST00000624624 2338 ntBASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 AF013593.1-201ENST00000458074 1487 ntBASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms