RNA–Protein interactions for RNA: ENST00000618626.1

SLC46A1-208, Transcript of solute carrier family 46 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC46A1, Length 5,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-208ENST00000618626 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
SLC46A1-208ENST00000618626 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
SLC46A1-208ENST00000618626 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.22
SLC46A1-208ENST00000618626 SHROOM4Q9ULL8 1493 aa22.35■■□□□ 1.17
SLC46A1-208ENST00000618626 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
SLC46A1-208ENST00000618626 APLP2Q06481 763 aa21.37■■□□□ 1.01
SLC46A1-208ENST00000618626 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
SLC46A1-208ENST00000618626 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
SLC46A1-208ENST00000618626 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
SLC46A1-208ENST00000618626 PELP1Q8IZL8 1130 aaKnown RBP21.04■□□□□ 0.96
SLC46A1-208ENST00000618626 ZEB1P37275 1124 aaPredicted RBP20.92■□□□□ 0.94
SLC46A1-208ENST00000618626 TTBK1Q5TCY1 1321 aaPredicted RBP20.85■□□□□ 0.93
SLC46A1-208ENST00000618626 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
SLC46A1-208ENST00000618626 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
SLC46A1-208ENST00000618626 RANGAP1P46060 587 aaPredicted RBP20.68■□□□□ 0.9
SLC46A1-208ENST00000618626 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
SLC46A1-208ENST00000618626 ATP1B4Q9UN42 357 aaPredicted RBP20.5■□□□□ 0.87
SLC46A1-208ENST00000618626 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
SLC46A1-208ENST00000618626 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
SLC46A1-208ENST00000618626 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
SLC46A1-208ENST00000618626 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
SLC46A1-208ENST00000618626 HRCP23327 699 aa20.22■□□□□ 0.83
SLC46A1-208ENST00000618626 ABCC9O60706 1549 aa20.06■□□□□ 0.8
SLC46A1-208ENST00000618626 NEFLP07196 543 aa20.03■□□□□ 0.8
SLC46A1-208ENST00000618626 ERICH6Q7L0X2 663 aa20■□□□□ 0.79
SLC46A1-208ENST00000618626 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
SLC46A1-208ENST00000618626 ITGAEP38570 1179 aa19.9■□□□□ 0.78
SLC46A1-208ENST00000618626 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.77
SLC46A1-208ENST00000618626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.83■□□□□ 0.76
SLC46A1-208ENST00000618626 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
SLC46A1-208ENST00000618626 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
SLC46A1-208ENST00000618626 MYT1Q01538 1121 aa19.62■□□□□ 0.73
SLC46A1-208ENST00000618626 MYT1LQ9UL68 1186 aa19.6■□□□□ 0.73
SLC46A1-208ENST00000618626 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
SLC46A1-208ENST00000618626 DIEXFQ68CQ4 756 aaKnown RBP19.57■□□□□ 0.72
SLC46A1-208ENST00000618626 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
SLC46A1-208ENST00000618626 FAM50AQ14320 339 aaKnown RBP19.53■□□□□ 0.72
SLC46A1-208ENST00000618626 CSRNP3Q8WYN3 585 aa19.47■□□□□ 0.71
SLC46A1-208ENST00000618626 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
SLC46A1-208ENST00000618626 TRIM52Q96A61 297 aa19.36■□□□□ 0.69
SLC46A1-208ENST00000618626 NEUROD1Q13562 356 aa19.29■□□□□ 0.68
SLC46A1-208ENST00000618626 DAXXQ9UER7 740 aaPredicted RBP19.28■□□□□ 0.68
SLC46A1-208ENST00000618626 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
SLC46A1-208ENST00000618626 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
SLC46A1-208ENST00000618626 ZNF316A6NFI3 1004 aaPredicted RBP19.24■□□□□ 0.67
SLC46A1-208ENST00000618626 ANP32CO43423 234 aa19.16■□□□□ 0.66
SLC46A1-208ENST00000618626 FBLN2P98095 1184 aa19.13■□□□□ 0.65
SLC46A1-208ENST00000618626 P3H3Q8IVL6 736 aa19.12■□□□□ 0.65
SLC46A1-208ENST00000618626 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
SLC46A1-208ENST00000618626 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
SLC46A1-208ENST00000618626 GTF3C3Q9Y5Q9 886 aa19.04■□□□□ 0.64
SLC46A1-208ENST00000618626 CDK11AQ9UQ88 783 aaPredicted RBP19.03■□□□□ 0.64
SLC46A1-208ENST00000618626 ZNF326Q5BKZ1 582 aaKnown RBP19.03■□□□□ 0.64
SLC46A1-208ENST00000618626 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
SLC46A1-208ENST00000618626 NACADO15069 1562 aa18.97■□□□□ 0.63
SLC46A1-208ENST00000618626 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
SLC46A1-208ENST00000618626 ACIN1Q9UKV3 1341 aaKnown RBP18.91■□□□□ 0.62
SLC46A1-208ENST00000618626 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
SLC46A1-208ENST00000618626 EEA1Q15075 1411 aa18.9■□□□□ 0.62
SLC46A1-208ENST00000618626 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
SLC46A1-208ENST00000618626 ZNF777Q9ULD5 760 aaPredicted RBP18.87■□□□□ 0.61
SLC46A1-208ENST00000618626 BCANQ96GW7 911 aa18.86■□□□□ 0.61
SLC46A1-208ENST00000618626 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
SLC46A1-208ENST00000618626 CLIP1P30622 1438 aa18.82■□□□□ 0.6
SLC46A1-208ENST00000618626 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
SLC46A1-208ENST00000618626 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
SLC46A1-208ENST00000618626 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
SLC46A1-208ENST00000618626 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
SLC46A1-208ENST00000618626 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
SLC46A1-208ENST00000618626 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
SLC46A1-208ENST00000618626 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
SLC46A1-208ENST00000618626 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
SLC46A1-208ENST00000618626 NEFMP07197 916 aa18.64■□□□□ 0.57
SLC46A1-208ENST00000618626 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
SLC46A1-208ENST00000618626 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
SLC46A1-208ENST00000618626 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
SLC46A1-208ENST00000618626 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
SLC46A1-208ENST00000618626 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
SLC46A1-208ENST00000618626 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
SLC46A1-208ENST00000618626 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
SLC46A1-208ENST00000618626 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
SLC46A1-208ENST00000618626 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
SLC46A1-208ENST00000618626 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
SLC46A1-208ENST00000618626 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
SLC46A1-208ENST00000618626 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
SLC46A1-208ENST00000618626 FKBP8Q14318 412 aa18.52■□□□□ 0.55
SLC46A1-208ENST00000618626 ANP32AP39687 249 aaKnown RBP18.49■□□□□ 0.55
SLC46A1-208ENST00000618626 FAM9BQ8IZU0 186 aa18.47■□□□□ 0.55
SLC46A1-208ENST00000618626 ESF1Q9H501 851 aaKnown RBP18.46■□□□□ 0.55
SLC46A1-208ENST00000618626 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.55
SLC46A1-208ENST00000618626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
SLC46A1-208ENST00000618626 MIER1Q8N108 512 aa18.42■□□□□ 0.54
SLC46A1-208ENST00000618626 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
SLC46A1-208ENST00000618626 EIF4G2P78344 907 aaKnown RBP eCLIP18.41■□□□□ 0.54
SLC46A1-208ENST00000618626 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
SLC46A1-208ENST00000618626 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
SLC46A1-208ENST00000618626 PLEKHD1A6NEE1 506 aa18.37■□□□□ 0.53
SLC46A1-208ENST00000618626 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
SLC46A1-208ENST00000618626 SLC24A1O60721 1099 aa18.36■□□□□ 0.53
SLC46A1-208ENST00000618626 KDM2AQ9Y2K7 1162 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms