RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-222ENST00000625672 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
NRXN1-222ENST00000625672 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
NRXN1-222ENST00000625672 EHMT2Q96KQ7 1210 aa22.28■■□□□ 1.16
NRXN1-222ENST00000625672 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
NRXN1-222ENST00000625672 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
NRXN1-222ENST00000625672 APLP2Q06481 763 aa21.93■■□□□ 1.1
NRXN1-222ENST00000625672 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
NRXN1-222ENST00000625672 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
NRXN1-222ENST00000625672 ERICH6Q7L0X2 663 aa21.48■■□□□ 1.03
NRXN1-222ENST00000625672 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1.01
NRXN1-222ENST00000625672 RANGAP1P46060 587 aaPredicted RBP21.33■■□□□ 1.01
NRXN1-222ENST00000625672 CCER1Q8TC90 406 aaPredicted RBP21.28■■□□□ 1
NRXN1-222ENST00000625672 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
NRXN1-222ENST00000625672 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.94
NRXN1-222ENST00000625672 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
NRXN1-222ENST00000625672 NEFLP07196 543 aa20.83■□□□□ 0.93
NRXN1-222ENST00000625672 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
NRXN1-222ENST00000625672 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
NRXN1-222ENST00000625672 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
NRXN1-222ENST00000625672 DAXXQ9UER7 740 aaPredicted RBP20.6■□□□□ 0.89
NRXN1-222ENST00000625672 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
NRXN1-222ENST00000625672 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
NRXN1-222ENST00000625672 POLR3GLQ9BT43 218 aa20.55■□□□□ 0.88
NRXN1-222ENST00000625672 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
NRXN1-222ENST00000625672 MYT1Q01538 1121 aa20.53■□□□□ 0.88
NRXN1-222ENST00000625672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.51■□□□□ 0.87
NRXN1-222ENST00000625672 HNRNPUL2Q1KMD3 747 aaKnown RBP20.51■□□□□ 0.87
NRXN1-222ENST00000625672 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
NRXN1-222ENST00000625672 CNGB1Q14028 1251 aaPredicted RBP20.33■□□□□ 0.84
NRXN1-222ENST00000625672 ITGAEP38570 1179 aa20.27■□□□□ 0.83
NRXN1-222ENST00000625672 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
NRXN1-222ENST00000625672 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.81
NRXN1-222ENST00000625672 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
NRXN1-222ENST00000625672 SLC24A1O60721 1099 aa19.89■□□□□ 0.78
NRXN1-222ENST00000625672 RTL5Q5HYW3 569 aaPredicted RBP19.8■□□□□ 0.76
NRXN1-222ENST00000625672 ZBTB47Q9UFB7 747 aaPredicted RBP19.79■□□□□ 0.76
NRXN1-222ENST00000625672 BCL11AQ9H165 835 aa19.73■□□□□ 0.75
NRXN1-222ENST00000625672 BCANQ96GW7 911 aa19.72■□□□□ 0.75
NRXN1-222ENST00000625672 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
NRXN1-222ENST00000625672 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
NRXN1-222ENST00000625672 FAM50AQ14320 339 aaKnown RBP19.63■□□□□ 0.73
NRXN1-222ENST00000625672 ZNF326Q5BKZ1 582 aaKnown RBP19.54■□□□□ 0.72
NRXN1-222ENST00000625672 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
NRXN1-222ENST00000625672 NEFMP07197 916 aa19.5■□□□□ 0.71
NRXN1-222ENST00000625672 FBLN2P98095 1184 aa19.48■□□□□ 0.71
NRXN1-222ENST00000625672 HRCP23327 699 aa19.46■□□□□ 0.71
NRXN1-222ENST00000625672 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
NRXN1-222ENST00000625672 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
NRXN1-222ENST00000625672 ESF1Q9H501 851 aaKnown RBP19.32■□□□□ 0.68
NRXN1-222ENST00000625672 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
NRXN1-222ENST00000625672 ANP32CO43423 234 aa19.23■□□□□ 0.67
NRXN1-222ENST00000625672 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
NRXN1-222ENST00000625672 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
NRXN1-222ENST00000625672 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
NRXN1-222ENST00000625672 ARID3CA6NKF2 412 aa19.14■□□□□ 0.66
NRXN1-222ENST00000625672 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
NRXN1-222ENST00000625672 A0A0G2JS52 829 aa19.07■□□□□ 0.64
NRXN1-222ENST00000625672 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
NRXN1-222ENST00000625672 HSP90AA1P07900 732 aaKnown RBP19.07■□□□□ 0.64
NRXN1-222ENST00000625672 ZNF777Q9ULD5 760 aaPredicted RBP19.07■□□□□ 0.64
NRXN1-222ENST00000625672 CHGAP10645 457 aaKnown RBP19.06■□□□□ 0.64
NRXN1-222ENST00000625672 ANP32BQ92688 251 aaKnown RBP19.05■□□□□ 0.64
NRXN1-222ENST00000625672 NPM2Q86SE8 214 aaKnown RBP19■□□□□ 0.63
NRXN1-222ENST00000625672 ANP32AP39687 249 aaKnown RBP18.96■□□□□ 0.63
NRXN1-222ENST00000625672 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
NRXN1-222ENST00000625672 CDK11BP21127 795 aaKnown RBP18.95■□□□□ 0.62
NRXN1-222ENST00000625672 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.62
NRXN1-222ENST00000625672 UPF2Q9HAU5 1272 aaKnown RBP18.86■□□□□ 0.61
NRXN1-222ENST00000625672 ABCC9O60706 1549 aa18.84■□□□□ 0.61
NRXN1-222ENST00000625672 PLEKHG5O94827 1062 aa18.83■□□□□ 0.6
NRXN1-222ENST00000625672 ZBTB7CA1YPR0 619 aa18.81■□□□□ 0.6
NRXN1-222ENST00000625672 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
NRXN1-222ENST00000625672 EIF5BO60841 1220 aaKnown RBP18.76■□□□□ 0.59
NRXN1-222ENST00000625672 C14orf37Q86TY3 774 aa18.72■□□□□ 0.59
NRXN1-222ENST00000625672 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
NRXN1-222ENST00000625672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
NRXN1-222ENST00000625672 TULP1O00294 542 aaPredicted RBP18.68■□□□□ 0.58
NRXN1-222ENST00000625672 ARXQ96QS3 562 aa18.66■□□□□ 0.58
NRXN1-222ENST00000625672 HAP1P54257 671 aaPredicted RBP18.65■□□□□ 0.58
NRXN1-222ENST00000625672 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
NRXN1-222ENST00000625672 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.61■□□□□ 0.57
NRXN1-222ENST00000625672 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
NRXN1-222ENST00000625672 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
NRXN1-222ENST00000625672 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
NRXN1-222ENST00000625672 TONSLQ96HA7 1378 aa18.57■□□□□ 0.56
NRXN1-222ENST00000625672 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.56
NRXN1-222ENST00000625672 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
NRXN1-222ENST00000625672 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
NRXN1-222ENST00000625672 NPHP1O15259 732 aa18.5■□□□□ 0.55
NRXN1-222ENST00000625672 FKBP8Q14318 412 aa18.48■□□□□ 0.55
NRXN1-222ENST00000625672 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
NRXN1-222ENST00000625672 GLIPR1L2Q4G1C9 344 aa18.48■□□□□ 0.55
NRXN1-222ENST00000625672 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
NRXN1-222ENST00000625672 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
NRXN1-222ENST00000625672 CCDC136Q96JN2 1154 aa18.43■□□□□ 0.54
NRXN1-222ENST00000625672 NCLP19338 710 aaKnown RBP18.42■□□□□ 0.54
NRXN1-222ENST00000625672 NBR1Q14596 966 aa18.41■□□□□ 0.54
NRXN1-222ENST00000625672 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
NRXN1-222ENST00000625672 ZRSR1Q15695 479 aaKnown RBP18.4■□□□□ 0.54
NRXN1-222ENST00000625672 TSPY4P0CV99 314 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms