RNA–Protein interactions for RNA: ENST00000342888.3

LINC01662-201, Transcript of long intergenic non-protein coding RNA 1662, humanhuman

TSL 2 BASIC

Gene LINC01662, Length 1,859 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01662-201ENST00000342888 NISCHQ9Y2I1 1504 aa33.13■■■□□ 2.89
LINC01662-201ENST00000342888 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
LINC01662-201ENST00000342888 ABCC9O60706 1549 aa28.11■■■□□ 2.09
LINC01662-201ENST00000342888 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
LINC01662-201ENST00000342888 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
LINC01662-201ENST00000342888 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
LINC01662-201ENST00000342888 NACADO15069 1562 aa27.16■■□□□ 1.94
LINC01662-201ENST00000342888 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
LINC01662-201ENST00000342888 RB1CC1Q8TDY2 1594 aa27.06■■□□□ 1.92
LINC01662-201ENST00000342888 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
LINC01662-201ENST00000342888 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
LINC01662-201ENST00000342888 UNC13AQ9UPW8 1703 aa26.6■■□□□ 1.85
LINC01662-201ENST00000342888 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
LINC01662-201ENST00000342888 BICRAQ9NZM4 1560 aa26.36■■□□□ 1.81
LINC01662-201ENST00000342888 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
LINC01662-201ENST00000342888 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
LINC01662-201ENST00000342888 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.69
LINC01662-201ENST00000342888 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
LINC01662-201ENST00000342888 EIF4G1Q04637 1599 aaKnown RBP25.57■■□□□ 1.68
LINC01662-201ENST00000342888 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
LINC01662-201ENST00000342888 RSF1Q96T23 1441 aaPredicted RBP25.57■■□□□ 1.68
LINC01662-201ENST00000342888 WIZO95785 1651 aa25.44■■□□□ 1.66
LINC01662-201ENST00000342888 DNAJC5BQ9UF47 199 aa25.36■■□□□ 1.65
LINC01662-201ENST00000342888 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
LINC01662-201ENST00000342888 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
LINC01662-201ENST00000342888 PEG3Q9GZU2 1588 aa25.2■■□□□ 1.62
LINC01662-201ENST00000342888 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
LINC01662-201ENST00000342888 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
LINC01662-201ENST00000342888 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
LINC01662-201ENST00000342888 TOP2AP11388 1531 aaKnown RBP25.04■■□□□ 1.6
LINC01662-201ENST00000342888 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
LINC01662-201ENST00000342888 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
LINC01662-201ENST00000342888 NESP48681 1621 aa24.55■■□□□ 1.52
LINC01662-201ENST00000342888 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
LINC01662-201ENST00000342888 CFTRP13569 1480 aa24.43■■□□□ 1.5
LINC01662-201ENST00000342888 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
LINC01662-201ENST00000342888 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
LINC01662-201ENST00000342888 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
LINC01662-201ENST00000342888 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
LINC01662-201ENST00000342888 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
LINC01662-201ENST00000342888 KIF21AQ7Z4S6 1674 aa24.17■■□□□ 1.46
LINC01662-201ENST00000342888 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
LINC01662-201ENST00000342888 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
LINC01662-201ENST00000342888 ERCC6Q03468 1493 aa24.08■■□□□ 1.44
LINC01662-201ENST00000342888 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
LINC01662-201ENST00000342888 TRIM41Q8WV44 630 aa24.02■■□□□ 1.44
LINC01662-201ENST00000342888 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
LINC01662-201ENST00000342888 CUX1P39880 1505 aa24.01■■□□□ 1.43
LINC01662-201ENST00000342888 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
LINC01662-201ENST00000342888 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
LINC01662-201ENST00000342888 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
LINC01662-201ENST00000342888 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
LINC01662-201ENST00000342888 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
LINC01662-201ENST00000342888 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
LINC01662-201ENST00000342888 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
LINC01662-201ENST00000342888 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
LINC01662-201ENST00000342888 WDR62O43379 1518 aa23.78■■□□□ 1.4
LINC01662-201ENST00000342888 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
LINC01662-201ENST00000342888 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
LINC01662-201ENST00000342888 FAM9AQ8IZU1 332 aaPredicted RBP23.73■■□□□ 1.39
LINC01662-201ENST00000342888 SOGA1O94964 1423 aa23.7■■□□□ 1.38
LINC01662-201ENST00000342888 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
LINC01662-201ENST00000342888 CUX2O14529 1486 aa23.68■■□□□ 1.38
LINC01662-201ENST00000342888 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.36
LINC01662-201ENST00000342888 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
LINC01662-201ENST00000342888 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
LINC01662-201ENST00000342888 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
LINC01662-201ENST00000342888 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
LINC01662-201ENST00000342888 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
LINC01662-201ENST00000342888 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.35
LINC01662-201ENST00000342888 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
LINC01662-201ENST00000342888 KIF27Q86VH2 1401 aa23.45■■□□□ 1.34
LINC01662-201ENST00000342888 CSRNP3Q8WYN3 585 aa23.4■■□□□ 1.34
LINC01662-201ENST00000342888 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.33
LINC01662-201ENST00000342888 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.33
LINC01662-201ENST00000342888 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
LINC01662-201ENST00000342888 IGF1RP08069 1367 aa23.37■■□□□ 1.33
LINC01662-201ENST00000342888 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
LINC01662-201ENST00000342888 EEA1Q15075 1411 aa23.31■■□□□ 1.32
LINC01662-201ENST00000342888 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
LINC01662-201ENST00000342888 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
LINC01662-201ENST00000342888 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
LINC01662-201ENST00000342888 CARMIL1Q5VZK9 1371 aa23.22■■□□□ 1.31
LINC01662-201ENST00000342888 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
LINC01662-201ENST00000342888 RAPGEF2Q9Y4G8 1499 aa23.19■■□□□ 1.3
LINC01662-201ENST00000342888 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
LINC01662-201ENST00000342888 FBLN2P98095 1184 aa23.16■■□□□ 1.3
LINC01662-201ENST00000342888 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
LINC01662-201ENST00000342888 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
LINC01662-201ENST00000342888 KIF21BO75037 1637 aa23.1■■□□□ 1.29
LINC01662-201ENST00000342888 CUL7Q14999 1698 aa23.1■■□□□ 1.29
LINC01662-201ENST00000342888 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
LINC01662-201ENST00000342888 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
LINC01662-201ENST00000342888 MAGI1Q96QZ7 1491 aaPredicted RBP23.07■■□□□ 1.28
LINC01662-201ENST00000342888 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
LINC01662-201ENST00000342888 RANGAP1P46060 587 aaPredicted RBP23.05■■□□□ 1.28
LINC01662-201ENST00000342888 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
LINC01662-201ENST00000342888 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
LINC01662-201ENST00000342888 CHD1O14646 1710 aa22.98■■□□□ 1.27
LINC01662-201ENST00000342888 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms