RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
NCSTN-202ENST00000368063 HRCP23327 699 aa22.52■■□□□ 1.2
NCSTN-202ENST00000368063 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
NCSTN-202ENST00000368063 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
NCSTN-202ENST00000368063 MYT1Q01538 1121 aa21.78■■□□□ 1.08
NCSTN-202ENST00000368063 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
NCSTN-202ENST00000368063 SCAF1Q9H7N4 1312 aaKnown RBP21.57■■□□□ 1.04
NCSTN-202ENST00000368063 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
NCSTN-202ENST00000368063 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
NCSTN-202ENST00000368063 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
NCSTN-202ENST00000368063 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
NCSTN-202ENST00000368063 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
NCSTN-202ENST00000368063 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
NCSTN-202ENST00000368063 ZEB1P37275 1124 aaPredicted RBP20.94■□□□□ 0.94
NCSTN-202ENST00000368063 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
NCSTN-202ENST00000368063 ACIN1Q9UKV3 1341 aaKnown RBP20.88■□□□□ 0.93
NCSTN-202ENST00000368063 NEUROD1Q13562 356 aa20.77■□□□□ 0.91
NCSTN-202ENST00000368063 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
NCSTN-202ENST00000368063 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
NCSTN-202ENST00000368063 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.89
NCSTN-202ENST00000368063 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.88
NCSTN-202ENST00000368063 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
NCSTN-202ENST00000368063 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
NCSTN-202ENST00000368063 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
NCSTN-202ENST00000368063 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
NCSTN-202ENST00000368063 ANP32EQ9BTT0 268 aa19.97■□□□□ 0.79
NCSTN-202ENST00000368063 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
NCSTN-202ENST00000368063 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
NCSTN-202ENST00000368063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
NCSTN-202ENST00000368063 PRKCSHP14314 528 aaPredicted RBP19.87■□□□□ 0.77
NCSTN-202ENST00000368063 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
NCSTN-202ENST00000368063 YTHDC1Q96MU7 727 aaKnown RBP19.81■□□□□ 0.76
NCSTN-202ENST00000368063 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
NCSTN-202ENST00000368063 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
NCSTN-202ENST00000368063 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
NCSTN-202ENST00000368063 NACADO15069 1562 aa19.67■□□□□ 0.74
NCSTN-202ENST00000368063 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
NCSTN-202ENST00000368063 MIER1Q8N108 512 aa19.63■□□□□ 0.73
NCSTN-202ENST00000368063 SUPT16HQ9Y5B9 1047 aaKnown RBP19.61■□□□□ 0.73
NCSTN-202ENST00000368063 ABCC9O60706 1549 aa19.52■□□□□ 0.72
NCSTN-202ENST00000368063 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
NCSTN-202ENST00000368063 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
NCSTN-202ENST00000368063 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
NCSTN-202ENST00000368063 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
NCSTN-202ENST00000368063 APLP2Q06481 763 aa19.27■□□□□ 0.67
NCSTN-202ENST00000368063 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
NCSTN-202ENST00000368063 RSF1Q96T23 1441 aaPredicted RBP19.16■□□□□ 0.66
NCSTN-202ENST00000368063 RBM19Q9Y4C8 960 aaKnown RBP19.13■□□□□ 0.65
NCSTN-202ENST00000368063 MSH5O43196 834 aa19.06■□□□□ 0.64
NCSTN-202ENST00000368063 BCANQ96GW7 911 aa18.98■□□□□ 0.63
NCSTN-202ENST00000368063 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
NCSTN-202ENST00000368063 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
NCSTN-202ENST00000368063 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
NCSTN-202ENST00000368063 BAZ1AQ9NRL2 1556 aaPredicted RBP18.92■□□□□ 0.62
NCSTN-202ENST00000368063 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
NCSTN-202ENST00000368063 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
NCSTN-202ENST00000368063 FKBP8Q14318 412 aa18.9■□□□□ 0.62
NCSTN-202ENST00000368063 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
NCSTN-202ENST00000368063 FANCIQ9NVI1 1328 aa18.87■□□□□ 0.61
NCSTN-202ENST00000368063 DEKP35659 375 aaKnown RBP18.82■□□□□ 0.6
NCSTN-202ENST00000368063 WIZO95785 1651 aa18.79■□□□□ 0.6
NCSTN-202ENST00000368063 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
NCSTN-202ENST00000368063 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
NCSTN-202ENST00000368063 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
NCSTN-202ENST00000368063 TNIKQ9UKE5 1360 aa18.75■□□□□ 0.59
NCSTN-202ENST00000368063 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
NCSTN-202ENST00000368063 ITGAEP38570 1179 aa18.72■□□□□ 0.59
NCSTN-202ENST00000368063 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
NCSTN-202ENST00000368063 ERICH6BQ5W0A0 696 aa18.7■□□□□ 0.58
NCSTN-202ENST00000368063 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
NCSTN-202ENST00000368063 NEFLP07196 543 aa18.69■□□□□ 0.58
NCSTN-202ENST00000368063 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
NCSTN-202ENST00000368063 UBE2Q2Q8WVN8 375 aa18.63■□□□□ 0.57
NCSTN-202ENST00000368063 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
NCSTN-202ENST00000368063 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
NCSTN-202ENST00000368063 CCDC136Q96JN2 1154 aa18.54■□□□□ 0.56
NCSTN-202ENST00000368063 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
NCSTN-202ENST00000368063 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.55
NCSTN-202ENST00000368063 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
NCSTN-202ENST00000368063 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
NCSTN-202ENST00000368063 SOGA1O94964 1423 aa18.46■□□□□ 0.55
NCSTN-202ENST00000368063 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
NCSTN-202ENST00000368063 EEA1Q15075 1411 aa18.43■□□□□ 0.54
NCSTN-202ENST00000368063 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
NCSTN-202ENST00000368063 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
NCSTN-202ENST00000368063 IL27Q8NEV9 243 aa18.4■□□□□ 0.54
NCSTN-202ENST00000368063 TRIM52Q96A61 297 aa18.39■□□□□ 0.54
NCSTN-202ENST00000368063 NOP58Q9Y2X3 529 aaKnown RBP18.39■□□□□ 0.53
NCSTN-202ENST00000368063 NBR1Q14596 966 aa18.39■□□□□ 0.53
NCSTN-202ENST00000368063 VPS8Q8N3P4 1428 aa18.36■□□□□ 0.53
NCSTN-202ENST00000368063 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
NCSTN-202ENST00000368063 CCER2I3L3R5 266 aa18.35■□□□□ 0.53
NCSTN-202ENST00000368063 CLIP1P30622 1438 aa18.35■□□□□ 0.53
NCSTN-202ENST00000368063 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
NCSTN-202ENST00000368063 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
NCSTN-202ENST00000368063 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
NCSTN-202ENST00000368063 DDX10Q13206 875 aaKnown RBP18.31■□□□□ 0.52
NCSTN-202ENST00000368063 PPP1R15AO75807 674 aaPredicted RBP18.29■□□□□ 0.52
NCSTN-202ENST00000368063 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
NCSTN-202ENST00000368063 CUX2O14529 1486 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms