RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
SECISBP2-201ENST00000339901 CCDC180Q9P1Z9 1646 aa24.26■■□□□ 1.47
SECISBP2-201ENST00000339901 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
SECISBP2-201ENST00000339901 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
SECISBP2-201ENST00000339901 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
SECISBP2-201ENST00000339901 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
SECISBP2-201ENST00000339901 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
SECISBP2-201ENST00000339901 MYO15BQ96JP2 1530 aa22.79■■□□□ 1.24
SECISBP2-201ENST00000339901 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
SECISBP2-201ENST00000339901 ABCC9O60706 1549 aa22.64■■□□□ 1.21
SECISBP2-201ENST00000339901 SCRIBQ14160 1630 aa22.43■■□□□ 1.18
SECISBP2-201ENST00000339901 NACADO15069 1562 aa22.34■■□□□ 1.17
SECISBP2-201ENST00000339901 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
SECISBP2-201ENST00000339901 RB1CC1Q8TDY2 1594 aa22.17■■□□□ 1.14
SECISBP2-201ENST00000339901 HRCP23327 699 aa22.05■■□□□ 1.12
SECISBP2-201ENST00000339901 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
SECISBP2-201ENST00000339901 CECR2Q9BXF3 1484 aa21.94■■□□□ 1.1
SECISBP2-201ENST00000339901 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
SECISBP2-201ENST00000339901 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
SECISBP2-201ENST00000339901 WIZO95785 1651 aa21.82■■□□□ 1.08
SECISBP2-201ENST00000339901 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
SECISBP2-201ENST00000339901 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
SECISBP2-201ENST00000339901 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
SECISBP2-201ENST00000339901 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
SECISBP2-201ENST00000339901 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
SECISBP2-201ENST00000339901 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
SECISBP2-201ENST00000339901 TOP2AP11388 1531 aaKnown RBP21.57■■□□□ 1.04
SECISBP2-201ENST00000339901 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
SECISBP2-201ENST00000339901 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
SECISBP2-201ENST00000339901 PPARGC1BQ86YN6 1023 aaKnown RBP21.37■■□□□ 1.01
SECISBP2-201ENST00000339901 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
SECISBP2-201ENST00000339901 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
SECISBP2-201ENST00000339901 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
SECISBP2-201ENST00000339901 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
SECISBP2-201ENST00000339901 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
SECISBP2-201ENST00000339901 EEA1Q15075 1411 aa21.11■□□□□ 0.97
SECISBP2-201ENST00000339901 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
SECISBP2-201ENST00000339901 EHMT2Q96KQ7 1210 aa21.03■□□□□ 0.96
SECISBP2-201ENST00000339901 SOGA1O94964 1423 aa21.01■□□□□ 0.95
SECISBP2-201ENST00000339901 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
SECISBP2-201ENST00000339901 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.955e-7■■■■□ 24.9
SECISBP2-201ENST00000339901 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
SECISBP2-201ENST00000339901 CEP162Q5TB80 1403 aa20.96■□□□□ 0.95
SECISBP2-201ENST00000339901 RUSC2Q8N2Y8 1516 aa20.91■□□□□ 0.94
SECISBP2-201ENST00000339901 CSRNP3Q8WYN3 585 aa20.89■□□□□ 0.94
SECISBP2-201ENST00000339901 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
SECISBP2-201ENST00000339901 GOLGA3Q08378 1498 aa20.87■□□□□ 0.93
SECISBP2-201ENST00000339901 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
SECISBP2-201ENST00000339901 KIF21BO75037 1637 aa20.86■□□□□ 0.93
SECISBP2-201ENST00000339901 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
SECISBP2-201ENST00000339901 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
SECISBP2-201ENST00000339901 BIVM-ERCC5R4GMW8 1640 aa20.7■□□□□ 0.9
SECISBP2-201ENST00000339901 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
SECISBP2-201ENST00000339901 UBTFP17480 764 aaKnown RBP20.66■□□□□ 0.9
SECISBP2-201ENST00000339901 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
SECISBP2-201ENST00000339901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
SECISBP2-201ENST00000339901 CCER1Q8TC90 406 aaPredicted RBP20.59■□□□□ 0.89
SECISBP2-201ENST00000339901 CLIP1P30622 1438 aa20.56■□□□□ 0.88
SECISBP2-201ENST00000339901 RAPGEF2Q9Y4G8 1499 aa20.54■□□□□ 0.88
SECISBP2-201ENST00000339901 VPS8Q8N3P4 1428 aa20.54■□□□□ 0.88
SECISBP2-201ENST00000339901 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
SECISBP2-201ENST00000339901 PRXQ9BXM0 1461 aa20.47■□□□□ 0.87
SECISBP2-201ENST00000339901 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
SECISBP2-201ENST00000339901 CUX1P39880 1505 aa20.44■□□□□ 0.86
SECISBP2-201ENST00000339901 CFTRP13569 1480 aa20.44■□□□□ 0.86
SECISBP2-201ENST00000339901 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
SECISBP2-201ENST00000339901 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
SECISBP2-201ENST00000339901 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
SECISBP2-201ENST00000339901 DIEXFQ68CQ4 756 aaKnown RBP20.23■□□□□ 0.83
SECISBP2-201ENST00000339901 APLP2Q06481 763 aa20.22■□□□□ 0.83
SECISBP2-201ENST00000339901 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
SECISBP2-201ENST00000339901 ZNF316A6NFI3 1004 aaPredicted RBP20.15■□□□□ 0.82
SECISBP2-201ENST00000339901 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.81
SECISBP2-201ENST00000339901 HNRNPUL2Q1KMD3 747 aaKnown RBP20.14■□□□□ 0.81
SECISBP2-201ENST00000339901 ARHGAP35Q9NRY4 1499 aa20.12■□□□□ 0.81
SECISBP2-201ENST00000339901 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
SECISBP2-201ENST00000339901 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
SECISBP2-201ENST00000339901 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
SECISBP2-201ENST00000339901 IGF1RP08069 1367 aa20.08■□□□□ 0.8
SECISBP2-201ENST00000339901 CUX2O14529 1486 aa20.07■□□□□ 0.8
SECISBP2-201ENST00000339901 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
SECISBP2-201ENST00000339901 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
SECISBP2-201ENST00000339901 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
SECISBP2-201ENST00000339901 FGD5Q6ZNL6 1462 aa20.03■□□□□ 0.8
SECISBP2-201ENST00000339901 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
SECISBP2-201ENST00000339901 NEUROD1Q13562 356 aa20■□□□□ 0.79
SECISBP2-201ENST00000339901 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
SECISBP2-201ENST00000339901 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
SECISBP2-201ENST00000339901 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
SECISBP2-201ENST00000339901 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
SECISBP2-201ENST00000339901 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
SECISBP2-201ENST00000339901 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
SECISBP2-201ENST00000339901 CCNB3Q8WWL7 1395 aa19.92■□□□□ 0.78
SECISBP2-201ENST00000339901 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
SECISBP2-201ENST00000339901 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
SECISBP2-201ENST00000339901 CFAP43Q8NDM7 1665 aa19.89■□□□□ 0.77
SECISBP2-201ENST00000339901 CUL7Q14999 1698 aa19.85■□□□□ 0.77
SECISBP2-201ENST00000339901 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
SECISBP2-201ENST00000339901 TOPBP1Q92547 1522 aa19.84■□□□□ 0.77
SECISBP2-201ENST00000339901 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms