RNA–Protein interactions for RNA: ENST00000357886.8

CDK5RAP1-203, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK5RAP1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-203ENST00000357886 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
CDK5RAP1-203ENST00000357886 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
CDK5RAP1-203ENST00000357886 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
CDK5RAP1-203ENST00000357886 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
CDK5RAP1-203ENST00000357886 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
CDK5RAP1-203ENST00000357886 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
CDK5RAP1-203ENST00000357886 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
CDK5RAP1-203ENST00000357886 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
CDK5RAP1-203ENST00000357886 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
CDK5RAP1-203ENST00000357886 HRCP23327 699 aa22.24■■□□□ 1.15
CDK5RAP1-203ENST00000357886 ABCC9O60706 1549 aa22.2■■□□□ 1.14
CDK5RAP1-203ENST00000357886 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
CDK5RAP1-203ENST00000357886 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
CDK5RAP1-203ENST00000357886 SCRIBQ14160 1630 aa22■■□□□ 1.11
CDK5RAP1-203ENST00000357886 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
CDK5RAP1-203ENST00000357886 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
CDK5RAP1-203ENST00000357886 NACADO15069 1562 aa21.73■■□□□ 1.07
CDK5RAP1-203ENST00000357886 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
CDK5RAP1-203ENST00000357886 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
CDK5RAP1-203ENST00000357886 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
CDK5RAP1-203ENST00000357886 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
CDK5RAP1-203ENST00000357886 MROH2BQ7Z745 1585 aa21.55■■□□□ 1.04
CDK5RAP1-203ENST00000357886 WIZO95785 1651 aa21.44■■□□□ 1.02
CDK5RAP1-203ENST00000357886 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
CDK5RAP1-203ENST00000357886 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
CDK5RAP1-203ENST00000357886 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
CDK5RAP1-203ENST00000357886 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
CDK5RAP1-203ENST00000357886 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
CDK5RAP1-203ENST00000357886 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
CDK5RAP1-203ENST00000357886 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
CDK5RAP1-203ENST00000357886 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
CDK5RAP1-203ENST00000357886 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
CDK5RAP1-203ENST00000357886 SMARCA2P51531 1590 aa21.01■□□□□ 0.95
CDK5RAP1-203ENST00000357886 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
CDK5RAP1-203ENST00000357886 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
CDK5RAP1-203ENST00000357886 SOGA1O94964 1423 aa20.82■□□□□ 0.92
CDK5RAP1-203ENST00000357886 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
CDK5RAP1-203ENST00000357886 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
CDK5RAP1-203ENST00000357886 TNIKQ9UKE5 1360 aa20.75■□□□□ 0.91
CDK5RAP1-203ENST00000357886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
CDK5RAP1-203ENST00000357886 EEA1Q15075 1411 aa20.73■□□□□ 0.91
CDK5RAP1-203ENST00000357886 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
CDK5RAP1-203ENST00000357886 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
CDK5RAP1-203ENST00000357886 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
CDK5RAP1-203ENST00000357886 PABPN1Q86U42 306 aaKnown RBP eCLIP20.66■□□□□ 0.94e-8■■■■■ 30
CDK5RAP1-203ENST00000357886 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
CDK5RAP1-203ENST00000357886 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
CDK5RAP1-203ENST00000357886 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
CDK5RAP1-203ENST00000357886 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
CDK5RAP1-203ENST00000357886 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP1-203ENST00000357886 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
CDK5RAP1-203ENST00000357886 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
CDK5RAP1-203ENST00000357886 KIF21BO75037 1637 aa20.49■□□□□ 0.87
CDK5RAP1-203ENST00000357886 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
CDK5RAP1-203ENST00000357886 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
CDK5RAP1-203ENST00000357886 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
CDK5RAP1-203ENST00000357886 CLIP1P30622 1438 aa20.35■□□□□ 0.85
CDK5RAP1-203ENST00000357886 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
CDK5RAP1-203ENST00000357886 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
CDK5RAP1-203ENST00000357886 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
CDK5RAP1-203ENST00000357886 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
CDK5RAP1-203ENST00000357886 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
CDK5RAP1-203ENST00000357886 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
CDK5RAP1-203ENST00000357886 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
CDK5RAP1-203ENST00000357886 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
CDK5RAP1-203ENST00000357886 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP1-203ENST00000357886 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
CDK5RAP1-203ENST00000357886 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
CDK5RAP1-203ENST00000357886 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP1-203ENST00000357886 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
CDK5RAP1-203ENST00000357886 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
CDK5RAP1-203ENST00000357886 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
CDK5RAP1-203ENST00000357886 CUX1P39880 1505 aa20.06■□□□□ 0.8
CDK5RAP1-203ENST00000357886 APLP2Q06481 763 aa20.05■□□□□ 0.8
CDK5RAP1-203ENST00000357886 GTF3C3Q9Y5Q9 886 aa20.05■□□□□ 0.8
CDK5RAP1-203ENST00000357886 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
CDK5RAP1-203ENST00000357886 CFTRP13569 1480 aa19.95■□□□□ 0.78
CDK5RAP1-203ENST00000357886 MIER1Q8N108 512 aa19.94■□□□□ 0.78
CDK5RAP1-203ENST00000357886 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
CDK5RAP1-203ENST00000357886 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP1-203ENST00000357886 DHX57Q6P158 1386 aaKnown RBP19.91■□□□□ 0.78
CDK5RAP1-203ENST00000357886 CLSPNQ9HAW4 1339 aa19.88■□□□□ 0.77
CDK5RAP1-203ENST00000357886 RRBP1Q9P2E9 1410 aaKnown RBP19.88■□□□□ 0.77
CDK5RAP1-203ENST00000357886 ARHGAP35Q9NRY4 1499 aa19.86■□□□□ 0.77
CDK5RAP1-203ENST00000357886 YTHDC1Q96MU7 727 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP1-203ENST00000357886 CUX2O14529 1486 aa19.82■□□□□ 0.76
CDK5RAP1-203ENST00000357886 PRDM2Q13029 1718 aa19.81■□□□□ 0.76
CDK5RAP1-203ENST00000357886 IGF1RP08069 1367 aa19.75■□□□□ 0.75
CDK5RAP1-203ENST00000357886 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
CDK5RAP1-203ENST00000357886 CCNB3Q8WWL7 1395 aa19.74■□□□□ 0.75
CDK5RAP1-203ENST00000357886 MAP3K1Q13233 1512 aa19.68■□□□□ 0.74
CDK5RAP1-203ENST00000357886 CADPSQ9ULU8 1353 aa19.67■□□□□ 0.74
CDK5RAP1-203ENST00000357886 TIAM1Q13009 1591 aa19.67■□□□□ 0.74
CDK5RAP1-203ENST00000357886 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
CDK5RAP1-203ENST00000357886 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
CDK5RAP1-203ENST00000357886 MAPKBP1O60336 1514 aa19.59■□□□□ 0.73
CDK5RAP1-203ENST00000357886 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.72
CDK5RAP1-203ENST00000357886 LRRC9Q6ZRR7 1453 aa19.57■□□□□ 0.72
CDK5RAP1-203ENST00000357886 ITGAEP38570 1179 aa19.54■□□□□ 0.72
CDK5RAP1-203ENST00000357886 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms