RNA–Protein interactions for RNA: ENST00000503642.1

LYRM9-204, Transcript of LYR motif containing 9, humanhuman

TSL 3 BASIC

Gene LYRM9, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9-204ENST00000503642 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
LYRM9-204ENST00000503642 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
LYRM9-204ENST00000503642 ABCC9O60706 1549 aa32.69■■■□□ 2.82
LYRM9-204ENST00000503642 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
LYRM9-204ENST00000503642 NACADO15069 1562 aa31.13■■■□□ 2.57
LYRM9-204ENST00000503642 DCAF8L2P0C7V8 631 aa31.08■■■□□ 2.57
LYRM9-204ENST00000503642 MYO15BQ96JP2 1530 aa30.84■■■□□ 2.53
LYRM9-204ENST00000503642 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
LYRM9-204ENST00000503642 DNAJC5BQ9UF47 199 aa30.52■■■□□ 2.48
LYRM9-204ENST00000503642 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.48
LYRM9-204ENST00000503642 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
LYRM9-204ENST00000503642 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
LYRM9-204ENST00000503642 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
LYRM9-204ENST00000503642 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
LYRM9-204ENST00000503642 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
LYRM9-204ENST00000503642 EIF4G1Q04637 1599 aaKnown RBP29.52■■■□□ 2.32
LYRM9-204ENST00000503642 CC2D2AQ9P2K1 1620 aa29.51■■■□□ 2.31
LYRM9-204ENST00000503642 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
LYRM9-204ENST00000503642 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
LYRM9-204ENST00000503642 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
LYRM9-204ENST00000503642 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
LYRM9-204ENST00000503642 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
LYRM9-204ENST00000503642 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
LYRM9-204ENST00000503642 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
LYRM9-204ENST00000503642 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
LYRM9-204ENST00000503642 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
LYRM9-204ENST00000503642 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
LYRM9-204ENST00000503642 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
LYRM9-204ENST00000503642 CUX2O14529 1486 aa28.2■■■□□ 2.1
LYRM9-204ENST00000503642 NESP48681 1621 aa28.09■■■□□ 2.09
LYRM9-204ENST00000503642 LAMC3Q9Y6N6 1575 aa28.03■■■□□ 2.08
LYRM9-204ENST00000503642 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
LYRM9-204ENST00000503642 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
LYRM9-204ENST00000503642 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
LYRM9-204ENST00000503642 WIZO95785 1651 aa27.89■■■□□ 2.06
LYRM9-204ENST00000503642 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
LYRM9-204ENST00000503642 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
LYRM9-204ENST00000503642 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
LYRM9-204ENST00000503642 KIF21AQ7Z4S6 1674 aa27.64■■■□□ 2.02
LYRM9-204ENST00000503642 CFTRP13569 1480 aa27.62■■■□□ 2.01
LYRM9-204ENST00000503642 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
LYRM9-204ENST00000503642 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
LYRM9-204ENST00000503642 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
LYRM9-204ENST00000503642 WDR62O43379 1518 aa27.49■■□□□ 1.99
LYRM9-204ENST00000503642 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
LYRM9-204ENST00000503642 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
LYRM9-204ENST00000503642 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
LYRM9-204ENST00000503642 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
LYRM9-204ENST00000503642 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
LYRM9-204ENST00000503642 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
LYRM9-204ENST00000503642 TOPBP1Q92547 1522 aa27.01■■□□□ 1.91
LYRM9-204ENST00000503642 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
LYRM9-204ENST00000503642 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
LYRM9-204ENST00000503642 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
LYRM9-204ENST00000503642 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
LYRM9-204ENST00000503642 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
LYRM9-204ENST00000503642 SOGA1O94964 1423 aa26.73■■□□□ 1.87
LYRM9-204ENST00000503642 AQRO60306 1485 aaKnown RBP eCLIP26.7■■□□□ 1.87
LYRM9-204ENST00000503642 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
LYRM9-204ENST00000503642 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
LYRM9-204ENST00000503642 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
LYRM9-204ENST00000503642 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
LYRM9-204ENST00000503642 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
LYRM9-204ENST00000503642 FBLN2P98095 1184 aa26.58■■□□□ 1.85
LYRM9-204ENST00000503642 CUX1P39880 1505 aa26.57■■□□□ 1.84
LYRM9-204ENST00000503642 WDR97A6NE52 1622 aa26.55■■□□□ 1.84
LYRM9-204ENST00000503642 CHMP7Q8WUX9 453 aaPredicted RBP26.47■■□□□ 1.83
LYRM9-204ENST00000503642 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
LYRM9-204ENST00000503642 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
LYRM9-204ENST00000503642 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
LYRM9-204ENST00000503642 RIMBP3CA6NJZ7 1639 aa26.41■■□□□ 1.82
LYRM9-204ENST00000503642 RIMBP3BA6NNM3 1639 aa26.41■■□□□ 1.82
LYRM9-204ENST00000503642 RIMBP3Q9UFD9 1639 aa26.41■■□□□ 1.82
LYRM9-204ENST00000503642 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
LYRM9-204ENST00000503642 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
LYRM9-204ENST00000503642 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
LYRM9-204ENST00000503642 ABCA10Q8WWZ4 1543 aa26.36■■□□□ 1.81
LYRM9-204ENST00000503642 CHD1O14646 1710 aa26.35■■□□□ 1.81
LYRM9-204ENST00000503642 CYB5RLQ6IPT4 315 aa26.34■■□□□ 1.81
LYRM9-204ENST00000503642 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
LYRM9-204ENST00000503642 SYNJ1O43426 1573 aa26.24■■□□□ 1.79
LYRM9-204ENST00000503642 TOP2BQ02880 1626 aa26.22■■□□□ 1.79
LYRM9-204ENST00000503642 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
LYRM9-204ENST00000503642 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
LYRM9-204ENST00000503642 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
LYRM9-204ENST00000503642 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
LYRM9-204ENST00000503642 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
LYRM9-204ENST00000503642 FHAD1B1AJZ9 1412 aa26.07■■□□□ 1.76
LYRM9-204ENST00000503642 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
LYRM9-204ENST00000503642 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
LYRM9-204ENST00000503642 TRHP20396 242 aaPredicted RBP26■■□□□ 1.75
LYRM9-204ENST00000503642 NUP160Q12769 1436 aa25.99■■□□□ 1.75
LYRM9-204ENST00000503642 ADAMTS12P58397 1594 aa25.97■■□□□ 1.75
LYRM9-204ENST00000503642 KIF27Q86VH2 1401 aa25.86■■□□□ 1.73
LYRM9-204ENST00000503642 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
LYRM9-204ENST00000503642 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
LYRM9-204ENST00000503642 IGF1RP08069 1367 aa25.82■■□□□ 1.72
LYRM9-204ENST00000503642 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
LYRM9-204ENST00000503642 PRG4Q92954 1404 aaPredicted RBP25.74■■□□□ 1.71
LYRM9-204ENST00000503642 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms