RNA–Protein interactions for RNA: ENST00000534941.2

C3orf33-205, Transcript of chromosome 3 open reading frame 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf33, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf33-205ENST00000534941 NISCHQ9Y2I1 1504 aa34.61■■■■□ 3.13
C3orf33-205ENST00000534941 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
C3orf33-205ENST00000534941 ABCC9O60706 1549 aa29.85■■■□□ 2.37
C3orf33-205ENST00000534941 DCAF8L2P0C7V8 631 aa28.95■■■□□ 2.23
C3orf33-205ENST00000534941 ZCCHC6Q5VYS8 1495 aaKnown RBP28.87■■■□□ 2.21
C3orf33-205ENST00000534941 NACADO15069 1562 aa28.74■■■□□ 2.19
C3orf33-205ENST00000534941 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
C3orf33-205ENST00000534941 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
C3orf33-205ENST00000534941 DCAF1Q9Y4B6 1507 aa28.57■■■□□ 2.16
C3orf33-205ENST00000534941 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
C3orf33-205ENST00000534941 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
C3orf33-205ENST00000534941 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
C3orf33-205ENST00000534941 BICRAQ9NZM4 1560 aa27.91■■■□□ 2.06
C3orf33-205ENST00000534941 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
C3orf33-205ENST00000534941 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
C3orf33-205ENST00000534941 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
C3orf33-205ENST00000534941 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
C3orf33-205ENST00000534941 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
C3orf33-205ENST00000534941 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
C3orf33-205ENST00000534941 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
C3orf33-205ENST00000534941 MROH2BQ7Z745 1585 aa26.73■■□□□ 1.87
C3orf33-205ENST00000534941 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
C3orf33-205ENST00000534941 SMARCA2P51531 1590 aa26.55■■□□□ 1.84
C3orf33-205ENST00000534941 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
C3orf33-205ENST00000534941 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
C3orf33-205ENST00000534941 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
C3orf33-205ENST00000534941 WIZO95785 1651 aa26.48■■□□□ 1.83
C3orf33-205ENST00000534941 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
C3orf33-205ENST00000534941 BAZ1BQ9UIG0 1483 aaKnown RBP26.4■■□□□ 1.82
C3orf33-205ENST00000534941 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
C3orf33-205ENST00000534941 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.77
C3orf33-205ENST00000534941 NESP48681 1621 aa25.92■■□□□ 1.74
C3orf33-205ENST00000534941 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
C3orf33-205ENST00000534941 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
C3orf33-205ENST00000534941 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
C3orf33-205ENST00000534941 CFTRP13569 1480 aa25.68■■□□□ 1.7
C3orf33-205ENST00000534941 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
C3orf33-205ENST00000534941 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
C3orf33-205ENST00000534941 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
C3orf33-205ENST00000534941 PRDM2Q13029 1718 aa25.53■■□□□ 1.68
C3orf33-205ENST00000534941 FANCD2Q9BXW9 1451 aa25.51■■□□□ 1.67
C3orf33-205ENST00000534941 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
C3orf33-205ENST00000534941 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
C3orf33-205ENST00000534941 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
C3orf33-205ENST00000534941 URB2Q14146 1524 aaKnown RBP25.26■■□□□ 1.63
C3orf33-205ENST00000534941 CUX2O14529 1486 aa25.25■■□□□ 1.63
C3orf33-205ENST00000534941 WDR62O43379 1518 aa25.24■■□□□ 1.63
C3orf33-205ENST00000534941 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
C3orf33-205ENST00000534941 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
C3orf33-205ENST00000534941 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
C3orf33-205ENST00000534941 CUX1P39880 1505 aa25.05■■□□□ 1.6
C3orf33-205ENST00000534941 WRNQ14191 1432 aaPredicted RBP eCLIP24.94■■□□□ 1.58
C3orf33-205ENST00000534941 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
C3orf33-205ENST00000534941 SYNJ1O43426 1573 aa24.91■■□□□ 1.58
C3orf33-205ENST00000534941 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
C3orf33-205ENST00000534941 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
C3orf33-205ENST00000534941 RAD54L2Q9Y4B4 1467 aa24.87■■□□□ 1.57
C3orf33-205ENST00000534941 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
C3orf33-205ENST00000534941 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
C3orf33-205ENST00000534941 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
C3orf33-205ENST00000534941 SOGA1O94964 1423 aa24.84■■□□□ 1.57
C3orf33-205ENST00000534941 ZNF608Q9ULD9 1512 aaPredicted RBP24.82■■□□□ 1.56
C3orf33-205ENST00000534941 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.553e-6■■■□□ 15.3
C3orf33-205ENST00000534941 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
C3orf33-205ENST00000534941 EIF4G3O43432 1585 aaKnown RBP24.7■■□□□ 1.54
C3orf33-205ENST00000534941 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
C3orf33-205ENST00000534941 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
C3orf33-205ENST00000534941 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
C3orf33-205ENST00000534941 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
C3orf33-205ENST00000534941 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
C3orf33-205ENST00000534941 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
C3orf33-205ENST00000534941 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
C3orf33-205ENST00000534941 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
C3orf33-205ENST00000534941 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
C3orf33-205ENST00000534941 FBLN2P98095 1184 aa24.4■■□□□ 1.5
C3orf33-205ENST00000534941 CHD1O14646 1710 aa24.39■■□□□ 1.49
C3orf33-205ENST00000534941 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
C3orf33-205ENST00000534941 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
C3orf33-205ENST00000534941 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
C3orf33-205ENST00000534941 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
C3orf33-205ENST00000534941 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
C3orf33-205ENST00000534941 OSCARQ8IYS5 282 aa24.31■■□□□ 1.48
C3orf33-205ENST00000534941 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
C3orf33-205ENST00000534941 IGF1RP08069 1367 aa24.3■■□□□ 1.48
C3orf33-205ENST00000534941 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
C3orf33-205ENST00000534941 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
C3orf33-205ENST00000534941 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
C3orf33-205ENST00000534941 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
C3orf33-205ENST00000534941 CUL7Q14999 1698 aa24.17■■□□□ 1.46
C3orf33-205ENST00000534941 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
C3orf33-205ENST00000534941 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
C3orf33-205ENST00000534941 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
C3orf33-205ENST00000534941 CLASP1Q7Z460 1538 aa24.06■■□□□ 1.44
C3orf33-205ENST00000534941 CSRNP3Q8WYN3 585 aa24.05■■□□□ 1.44
C3orf33-205ENST00000534941 NUP160Q12769 1436 aa24.05■■□□□ 1.44
C3orf33-205ENST00000534941 EEA1Q15075 1411 aa24.02■■□□□ 1.44
C3orf33-205ENST00000534941 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
C3orf33-205ENST00000534941 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
C3orf33-205ENST00000534941 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
C3orf33-205ENST00000534941 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms