RNA–Protein interactions for RNA: ENST00000398540.7

FRMD4B-201, Transcript of FERM domain containing 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRMD4B, Length 5,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4B-201ENST00000398540 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
FRMD4B-201ENST00000398540 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
FRMD4B-201ENST00000398540 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
FRMD4B-201ENST00000398540 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
FRMD4B-201ENST00000398540 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.25
FRMD4B-201ENST00000398540 FAM9AQ8IZU1 332 aaPredicted RBP22.48■■□□□ 1.19
FRMD4B-201ENST00000398540 ABCC9O60706 1549 aa22.4■■□□□ 1.18
FRMD4B-201ENST00000398540 TRIM41Q8WV44 630 aa22.24■■□□□ 1.15
FRMD4B-201ENST00000398540 APLP2Q06481 763 aa22.05■■□□□ 1.12
FRMD4B-201ENST00000398540 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
FRMD4B-201ENST00000398540 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
FRMD4B-201ENST00000398540 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
FRMD4B-201ENST00000398540 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
FRMD4B-201ENST00000398540 PCGF6Q9BYE7 350 aa21.76■■□□□ 1.07
FRMD4B-201ENST00000398540 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
FRMD4B-201ENST00000398540 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
FRMD4B-201ENST00000398540 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
FRMD4B-201ENST00000398540 ATP1B4Q9UN42 357 aaPredicted RBP21.61■■□□□ 1.05
FRMD4B-201ENST00000398540 SCRIBQ14160 1630 aa21.48■■□□□ 1.03
FRMD4B-201ENST00000398540 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
FRMD4B-201ENST00000398540 PPARGC1BQ86YN6 1023 aaKnown RBP21.41■■□□□ 1.02
FRMD4B-201ENST00000398540 CCER1Q8TC90 406 aaPredicted RBP21.24■□□□□ 0.99
FRMD4B-201ENST00000398540 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
FRMD4B-201ENST00000398540 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
FRMD4B-201ENST00000398540 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
FRMD4B-201ENST00000398540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
FRMD4B-201ENST00000398540 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
FRMD4B-201ENST00000398540 NACADO15069 1562 aa20.97■□□□□ 0.95
FRMD4B-201ENST00000398540 ITGAEP38570 1179 aa20.94■□□□□ 0.94
FRMD4B-201ENST00000398540 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
FRMD4B-201ENST00000398540 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
FRMD4B-201ENST00000398540 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
FRMD4B-201ENST00000398540 FBLN2P98095 1184 aa20.68■□□□□ 0.9
FRMD4B-201ENST00000398540 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
FRMD4B-201ENST00000398540 HRCP23327 699 aa20.6■□□□□ 0.89
FRMD4B-201ENST00000398540 FAM50AQ14320 339 aaKnown RBP20.54■□□□□ 0.88
FRMD4B-201ENST00000398540 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
FRMD4B-201ENST00000398540 P3H3Q8IVL6 736 aa20.54■□□□□ 0.88
FRMD4B-201ENST00000398540 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
FRMD4B-201ENST00000398540 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
FRMD4B-201ENST00000398540 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
FRMD4B-201ENST00000398540 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
FRMD4B-201ENST00000398540 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
FRMD4B-201ENST00000398540 YTHDC1Q96MU7 727 aaKnown RBP20.37■□□□□ 0.85
FRMD4B-201ENST00000398540 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
FRMD4B-201ENST00000398540 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
FRMD4B-201ENST00000398540 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.83
FRMD4B-201ENST00000398540 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
FRMD4B-201ENST00000398540 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
FRMD4B-201ENST00000398540 NEUROD1Q13562 356 aa20.16■□□□□ 0.82
FRMD4B-201ENST00000398540 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
FRMD4B-201ENST00000398540 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.8
FRMD4B-201ENST00000398540 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
FRMD4B-201ENST00000398540 EEA1Q15075 1411 aa20.05■□□□□ 0.8
FRMD4B-201ENST00000398540 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
FRMD4B-201ENST00000398540 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
FRMD4B-201ENST00000398540 CLIP1P30622 1438 aa20.04■□□□□ 0.8
FRMD4B-201ENST00000398540 WIZO95785 1651 aa20■□□□□ 0.79
FRMD4B-201ENST00000398540 GOLGA3Q08378 1498 aa20■□□□□ 0.79
FRMD4B-201ENST00000398540 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
FRMD4B-201ENST00000398540 NEFLP07196 543 aa19.99■□□□□ 0.79
FRMD4B-201ENST00000398540 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
FRMD4B-201ENST00000398540 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
FRMD4B-201ENST00000398540 CEP162Q5TB80 1403 aa19.94■□□□□ 0.78
FRMD4B-201ENST00000398540 ZNF326Q5BKZ1 582 aaKnown RBP19.94■□□□□ 0.78
FRMD4B-201ENST00000398540 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
FRMD4B-201ENST00000398540 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
FRMD4B-201ENST00000398540 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
FRMD4B-201ENST00000398540 SOGA1O94964 1423 aa19.87■□□□□ 0.77
FRMD4B-201ENST00000398540 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
FRMD4B-201ENST00000398540 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
FRMD4B-201ENST00000398540 MTUS2Q5JR59 1369 aa19.84■□□□□ 0.77
FRMD4B-201ENST00000398540 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
FRMD4B-201ENST00000398540 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.77
FRMD4B-201ENST00000398540 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
FRMD4B-201ENST00000398540 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
FRMD4B-201ENST00000398540 CHIC2Q9UKJ5 165 aa19.8■□□□□ 0.76
FRMD4B-201ENST00000398540 CUX2O14529 1486 aa19.79■□□□□ 0.76
FRMD4B-201ENST00000398540 ZNF316A6NFI3 1004 aaPredicted RBP19.72■□□□□ 0.75
FRMD4B-201ENST00000398540 CARMIL1Q5VZK9 1371 aa19.71■□□□□ 0.75
FRMD4B-201ENST00000398540 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
FRMD4B-201ENST00000398540 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
FRMD4B-201ENST00000398540 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
FRMD4B-201ENST00000398540 TSPY4P0CV99 314 aa19.61■□□□□ 0.73
FRMD4B-201ENST00000398540 TSPY10P0CW01 314 aa19.61■□□□□ 0.73
FRMD4B-201ENST00000398540 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
FRMD4B-201ENST00000398540 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
FRMD4B-201ENST00000398540 PLEKHD1A6NEE1 506 aa19.59■□□□□ 0.73
FRMD4B-201ENST00000398540 ANP32CO43423 234 aa19.59■□□□□ 0.73
FRMD4B-201ENST00000398540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.73
FRMD4B-201ENST00000398540 ERICH6Q7L0X2 663 aa19.57■□□□□ 0.72
FRMD4B-201ENST00000398540 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
FRMD4B-201ENST00000398540 RRP7BPQ9NSQ0 103 aa19.56■□□□□ 0.72
FRMD4B-201ENST00000398540 BCANQ96GW7 911 aa19.51■□□□□ 0.71
FRMD4B-201ENST00000398540 CHGAP10645 457 aaKnown RBP19.51■□□□□ 0.71
FRMD4B-201ENST00000398540 ESF1Q9H501 851 aaKnown RBP19.49■□□□□ 0.71
FRMD4B-201ENST00000398540 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
FRMD4B-201ENST00000398540 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
FRMD4B-201ENST00000398540 FANCD2Q9BXW9 1451 aa19.43■□□□□ 0.7
FRMD4B-201ENST00000398540 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms