RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
SIX1-203ENST00000554986 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
SIX1-203ENST00000554986 ABCC9O60706 1549 aa25.59■■□□□ 1.69
SIX1-203ENST00000554986 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
SIX1-203ENST00000554986 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
SIX1-203ENST00000554986 NACADO15069 1562 aa24.78■■□□□ 1.56
SIX1-203ENST00000554986 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
SIX1-203ENST00000554986 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
SIX1-203ENST00000554986 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
SIX1-203ENST00000554986 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
SIX1-203ENST00000554986 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
SIX1-203ENST00000554986 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
SIX1-203ENST00000554986 PABPN1Q86U42 306 aaKnown RBP eCLIP23.98■■□□□ 1.43
SIX1-203ENST00000554986 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
SIX1-203ENST00000554986 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
SIX1-203ENST00000554986 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
SIX1-203ENST00000554986 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
SIX1-203ENST00000554986 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
SIX1-203ENST00000554986 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
SIX1-203ENST00000554986 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
SIX1-203ENST00000554986 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.29
SIX1-203ENST00000554986 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
SIX1-203ENST00000554986 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
SIX1-203ENST00000554986 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
SIX1-203ENST00000554986 WIZO95785 1651 aa22.92■■□□□ 1.26
SIX1-203ENST00000554986 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
SIX1-203ENST00000554986 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
SIX1-203ENST00000554986 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
SIX1-203ENST00000554986 BAZ1BQ9UIG0 1483 aaKnown RBP22.78■■□□□ 1.24
SIX1-203ENST00000554986 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
SIX1-203ENST00000554986 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
SIX1-203ENST00000554986 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
SIX1-203ENST00000554986 NESP48681 1621 aa22.28■■□□□ 1.16
SIX1-203ENST00000554986 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
SIX1-203ENST00000554986 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
SIX1-203ENST00000554986 HRCP23327 699 aa22.18■■□□□ 1.14
SIX1-203ENST00000554986 CFTRP13569 1480 aa22.18■■□□□ 1.14
SIX1-203ENST00000554986 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
SIX1-203ENST00000554986 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
SIX1-203ENST00000554986 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
SIX1-203ENST00000554986 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
SIX1-203ENST00000554986 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
SIX1-203ENST00000554986 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
SIX1-203ENST00000554986 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
SIX1-203ENST00000554986 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
SIX1-203ENST00000554986 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
SIX1-203ENST00000554986 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
SIX1-203ENST00000554986 WDR62O43379 1518 aa21.73■■□□□ 1.07
SIX1-203ENST00000554986 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
SIX1-203ENST00000554986 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
SIX1-203ENST00000554986 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
SIX1-203ENST00000554986 CUX1P39880 1505 aa21.68■■□□□ 1.06
SIX1-203ENST00000554986 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.05
SIX1-203ENST00000554986 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
SIX1-203ENST00000554986 CUX2O14529 1486 aa21.6■■□□□ 1.05
SIX1-203ENST00000554986 PELP1Q8IZL8 1130 aaKnown RBP21.59■■□□□ 1.05
SIX1-203ENST00000554986 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
SIX1-203ENST00000554986 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
SIX1-203ENST00000554986 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
SIX1-203ENST00000554986 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
SIX1-203ENST00000554986 FGD5Q6ZNL6 1462 aa21.53■■□□□ 1.04
SIX1-203ENST00000554986 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
SIX1-203ENST00000554986 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
SIX1-203ENST00000554986 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
SIX1-203ENST00000554986 SOGA1O94964 1423 aa21.42■■□□□ 1.02
SIX1-203ENST00000554986 IFT140Q96RY7 1462 aa21.42■■□□□ 1.02
SIX1-203ENST00000554986 PPARGC1BQ86YN6 1023 aaKnown RBP21.37■■□□□ 1.01
SIX1-203ENST00000554986 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
SIX1-203ENST00000554986 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
SIX1-203ENST00000554986 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
SIX1-203ENST00000554986 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
SIX1-203ENST00000554986 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
SIX1-203ENST00000554986 EIF4G3O43432 1585 aaKnown RBP21.28■■□□□ 1
SIX1-203ENST00000554986 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 1
SIX1-203ENST00000554986 ABCA5Q8WWZ7 1642 aa21.23■□□□□ 0.99
SIX1-203ENST00000554986 GAPVD1Q14C86 1478 aa21.19■□□□□ 0.98
SIX1-203ENST00000554986 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
SIX1-203ENST00000554986 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
SIX1-203ENST00000554986 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
SIX1-203ENST00000554986 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
SIX1-203ENST00000554986 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
SIX1-203ENST00000554986 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
SIX1-203ENST00000554986 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
SIX1-203ENST00000554986 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
SIX1-203ENST00000554986 IGF1RP08069 1367 aa21.04■□□□□ 0.96
SIX1-203ENST00000554986 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
SIX1-203ENST00000554986 ADAMTS12P58397 1594 aa21■□□□□ 0.95
SIX1-203ENST00000554986 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
SIX1-203ENST00000554986 CHD1O14646 1710 aa20.96■□□□□ 0.95
SIX1-203ENST00000554986 CUL7Q14999 1698 aa20.95■□□□□ 0.94
SIX1-203ENST00000554986 EEA1Q15075 1411 aa20.94■□□□□ 0.94
SIX1-203ENST00000554986 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
SIX1-203ENST00000554986 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
SIX1-203ENST00000554986 FBLN2P98095 1184 aa20.92■□□□□ 0.94
SIX1-203ENST00000554986 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
SIX1-203ENST00000554986 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
SIX1-203ENST00000554986 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
SIX1-203ENST00000554986 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
SIX1-203ENST00000554986 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
SIX1-203ENST00000554986 MYT1Q01538 1121 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms