RNA–Protein interactions for RNA: ENST00000396168.1

PTPN5-203, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN5, Length 2,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-203ENST00000396168 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
PTPN5-203ENST00000396168 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
PTPN5-203ENST00000396168 ABCC9O60706 1549 aa23.12■■□□□ 1.29
PTPN5-203ENST00000396168 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
PTPN5-203ENST00000396168 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
PTPN5-203ENST00000396168 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
PTPN5-203ENST00000396168 HRCP23327 699 aa22.52■■□□□ 1.2
PTPN5-203ENST00000396168 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
PTPN5-203ENST00000396168 NACADO15069 1562 aa22.33■■□□□ 1.17
PTPN5-203ENST00000396168 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
PTPN5-203ENST00000396168 MYO15BQ96JP2 1530 aa22.25■■□□□ 1.15
PTPN5-203ENST00000396168 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
PTPN5-203ENST00000396168 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
PTPN5-203ENST00000396168 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
PTPN5-203ENST00000396168 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
PTPN5-203ENST00000396168 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
PTPN5-203ENST00000396168 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
PTPN5-203ENST00000396168 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
PTPN5-203ENST00000396168 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
PTPN5-203ENST00000396168 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
PTPN5-203ENST00000396168 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
PTPN5-203ENST00000396168 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
PTPN5-203ENST00000396168 RSF1Q96T23 1441 aaPredicted RBP21.28■■□□□ 1
PTPN5-203ENST00000396168 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
PTPN5-203ENST00000396168 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
PTPN5-203ENST00000396168 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
PTPN5-203ENST00000396168 MYT1Q01538 1121 aa21.1■□□□□ 0.97
PTPN5-203ENST00000396168 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
PTPN5-203ENST00000396168 FAM9AQ8IZU1 332 aaPredicted RBP21.02■□□□□ 0.96
PTPN5-203ENST00000396168 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.96
PTPN5-203ENST00000396168 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
PTPN5-203ENST00000396168 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
PTPN5-203ENST00000396168 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
PTPN5-203ENST00000396168 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
PTPN5-203ENST00000396168 ACIN1Q9UKV3 1341 aaKnown RBP20.81■□□□□ 0.92
PTPN5-203ENST00000396168 NEUROD1Q13562 356 aa20.76■□□□□ 0.91
PTPN5-203ENST00000396168 WIZO95785 1651 aa20.73■□□□□ 0.91
PTPN5-203ENST00000396168 SMARCA4P51532 1647 aa20.7■□□□□ 0.9
PTPN5-203ENST00000396168 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
PTPN5-203ENST00000396168 GTF3C3Q9Y5Q9 886 aa20.63■□□□□ 0.89
PTPN5-203ENST00000396168 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
PTPN5-203ENST00000396168 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
PTPN5-203ENST00000396168 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
PTPN5-203ENST00000396168 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
PTPN5-203ENST00000396168 HMGXB3Q12766 1538 aa20.51■□□□□ 0.87
PTPN5-203ENST00000396168 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
PTPN5-203ENST00000396168 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
PTPN5-203ENST00000396168 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
PTPN5-203ENST00000396168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.36■□□□□ 0.85
PTPN5-203ENST00000396168 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
PTPN5-203ENST00000396168 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
PTPN5-203ENST00000396168 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
PTPN5-203ENST00000396168 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
PTPN5-203ENST00000396168 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
PTPN5-203ENST00000396168 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
PTPN5-203ENST00000396168 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
PTPN5-203ENST00000396168 SOGA1O94964 1423 aa20.22■□□□□ 0.83
PTPN5-203ENST00000396168 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
PTPN5-203ENST00000396168 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
PTPN5-203ENST00000396168 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
PTPN5-203ENST00000396168 EEA1Q15075 1411 aa20.17■□□□□ 0.82
PTPN5-203ENST00000396168 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
PTPN5-203ENST00000396168 LAMC3Q9Y6N6 1575 aa20.07■□□□□ 0.8
PTPN5-203ENST00000396168 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
PTPN5-203ENST00000396168 NESP48681 1621 aa20.03■□□□□ 0.8
PTPN5-203ENST00000396168 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
PTPN5-203ENST00000396168 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
PTPN5-203ENST00000396168 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
PTPN5-203ENST00000396168 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
PTPN5-203ENST00000396168 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
PTPN5-203ENST00000396168 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
PTPN5-203ENST00000396168 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
PTPN5-203ENST00000396168 THOC2Q8NI27 1593 aaKnown RBP19.86■□□□□ 0.77
PTPN5-203ENST00000396168 CUX2O14529 1486 aa19.85■□□□□ 0.77
PTPN5-203ENST00000396168 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
PTPN5-203ENST00000396168 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
PTPN5-203ENST00000396168 CLIP1P30622 1438 aa19.84■□□□□ 0.77
PTPN5-203ENST00000396168 KIF21BO75037 1637 aa19.84■□□□□ 0.77
PTPN5-203ENST00000396168 CFTRP13569 1480 aa19.83■□□□□ 0.77
PTPN5-203ENST00000396168 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.76
PTPN5-203ENST00000396168 BCL11AQ9H165 835 aa19.83■□□□□ 0.76
PTPN5-203ENST00000396168 MIER1Q8N108 512 aa19.82■□□□□ 0.76
PTPN5-203ENST00000396168 APLP2Q06481 763 aa19.81■□□□□ 0.76
PTPN5-203ENST00000396168 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
PTPN5-203ENST00000396168 RANGAP1P46060 587 aaPredicted RBP19.73■□□□□ 0.75
PTPN5-203ENST00000396168 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
PTPN5-203ENST00000396168 ANP32EQ9BTT0 268 aa19.71■□□□□ 0.75
PTPN5-203ENST00000396168 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
PTPN5-203ENST00000396168 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
PTPN5-203ENST00000396168 WDR62O43379 1518 aa19.67■□□□□ 0.74
PTPN5-203ENST00000396168 SUPT16HQ9Y5B9 1047 aaKnown RBP19.61■□□□□ 0.73
PTPN5-203ENST00000396168 TSHZ2Q9NRE2 1034 aa19.61■□□□□ 0.73
PTPN5-203ENST00000396168 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
PTPN5-203ENST00000396168 URB2Q14146 1524 aaKnown RBP19.52■□□□□ 0.72
PTPN5-203ENST00000396168 CLSPNQ9HAW4 1339 aa19.52■□□□□ 0.71
PTPN5-203ENST00000396168 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
PTPN5-203ENST00000396168 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
PTPN5-203ENST00000396168 PRXQ9BXM0 1461 aa19.48■□□□□ 0.71
PTPN5-203ENST00000396168 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
PTPN5-203ENST00000396168 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms