Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT2P35908 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.92■□□□□ 0.14
KRT2P35908 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT2P35908 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT2P35908 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
KRT2P35908 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT2P35908 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT2P35908 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
KRT2P35908 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT2P35908 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
KRT2P35908 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
KRT2P35908 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT2P35908 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
KRT2P35908 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
KRT2P35908 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 PYY2-201ENST00000315776 282 ntBASIC15.91■□□□□ 0.14
KRT2P35908 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 AC106827.1-201ENST00000366454 431 ntBASIC15.91■□□□□ 0.14
KRT2P35908 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT2P35908 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT2P35908 AL592076.1-201ENST00000424448 303 ntBASIC15.91■□□□□ 0.14
KRT2P35908 AL512306.1-201ENST00000432698 848 ntBASIC15.91■□□□□ 0.14
KRT2P35908 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT2P35908 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT2P35908 AC234782.1-201ENST00000451950 919 ntBASIC15.91■□□□□ 0.14
KRT2P35908 GRPEL2P1-201ENST00000453145 339 ntBASIC15.91■□□□□ 0.14
KRT2P35908 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
KRT2P35908 NDUFS6P1-201ENST00000485187 316 ntBASIC15.91■□□□□ 0.14
KRT2P35908 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.91■□□□□ 0.14
KRT2P35908 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT2P35908 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT2P35908 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.91■□□□□ 0.14
KRT2P35908 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT2P35908 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KRT2P35908 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.91■□□□□ 0.14
KRT2P35908 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
KRT2P35908 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.91■□□□□ 0.14
KRT2P35908 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
KRT2P35908 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT2P35908 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT2P35908 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT2P35908 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 AL627231.1-201ENST00000394467 1125 ntBASIC15.9■□□□□ 0.14
KRT2P35908 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 IMP3P2-201ENST00000489760 475 ntBASIC15.9■□□□□ 0.14
KRT2P35908 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.9■□□□□ 0.14
KRT2P35908 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.9■□□□□ 0.14
KRT2P35908 MIR4522-201ENST00000584932 87 ntBASIC15.9■□□□□ 0.14
KRT2P35908 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.9■□□□□ 0.14
KRT2P35908 AL021578.1-201ENST00000613646 709 ntBASIC15.9■□□□□ 0.14
KRT2P35908 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
KRT2P35908 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT2P35908 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT2P35908 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT2P35908 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.89■□□□□ 0.14
KRT2P35908 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
KRT2P35908 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT2P35908 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT2P35908 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms