RNA–Protein interactions for RNA: ENST00000542191.5

SNCAIP-222, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5 BASIC

Gene SNCAIP, Length 2,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-222ENST00000542191 NISCHQ9Y2I1 1504 aa30.19■■■□□ 2.42
SNCAIP-222ENST00000542191 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
SNCAIP-222ENST00000542191 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
SNCAIP-222ENST00000542191 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
SNCAIP-222ENST00000542191 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
SNCAIP-222ENST00000542191 ABCC9O60706 1549 aa25.04■■□□□ 1.6
SNCAIP-222ENST00000542191 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
SNCAIP-222ENST00000542191 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
SNCAIP-222ENST00000542191 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
SNCAIP-222ENST00000542191 NACADO15069 1562 aa24.06■■□□□ 1.44
SNCAIP-222ENST00000542191 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
SNCAIP-222ENST00000542191 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
SNCAIP-222ENST00000542191 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
SNCAIP-222ENST00000542191 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
SNCAIP-222ENST00000542191 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
SNCAIP-222ENST00000542191 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
SNCAIP-222ENST00000542191 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
SNCAIP-222ENST00000542191 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
SNCAIP-222ENST00000542191 WIZO95785 1651 aa23.46■■□□□ 1.35
SNCAIP-222ENST00000542191 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
SNCAIP-222ENST00000542191 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
SNCAIP-222ENST00000542191 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
SNCAIP-222ENST00000542191 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
SNCAIP-222ENST00000542191 LOC105371045A0A1W2PR82 267 aa23.17■■□□□ 1.3
SNCAIP-222ENST00000542191 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
SNCAIP-222ENST00000542191 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
SNCAIP-222ENST00000542191 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
SNCAIP-222ENST00000542191 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
SNCAIP-222ENST00000542191 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
SNCAIP-222ENST00000542191 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
SNCAIP-222ENST00000542191 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
SNCAIP-222ENST00000542191 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
SNCAIP-222ENST00000542191 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
SNCAIP-222ENST00000542191 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
SNCAIP-222ENST00000542191 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
SNCAIP-222ENST00000542191 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
SNCAIP-222ENST00000542191 SOGA1O94964 1423 aa22.41■■□□□ 1.18
SNCAIP-222ENST00000542191 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
SNCAIP-222ENST00000542191 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
SNCAIP-222ENST00000542191 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
SNCAIP-222ENST00000542191 NCAPD3P42695 1498 aa22.33■■□□□ 1.17
SNCAIP-222ENST00000542191 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
SNCAIP-222ENST00000542191 RANGAP1P46060 587 aaPredicted RBP22.3■■□□□ 1.16
SNCAIP-222ENST00000542191 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
SNCAIP-222ENST00000542191 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
SNCAIP-222ENST00000542191 HMGXB3Q12766 1538 aa22.2■■□□□ 1.15
SNCAIP-222ENST00000542191 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
SNCAIP-222ENST00000542191 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
SNCAIP-222ENST00000542191 NESP48681 1621 aa22.09■■□□□ 1.13
SNCAIP-222ENST00000542191 CFTRP13569 1480 aa22.01■■□□□ 1.11
SNCAIP-222ENST00000542191 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
SNCAIP-222ENST00000542191 CUX1P39880 1505 aa21.96■■□□□ 1.11
SNCAIP-222ENST00000542191 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
SNCAIP-222ENST00000542191 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
SNCAIP-222ENST00000542191 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
SNCAIP-222ENST00000542191 TRIM26Q12899 539 aaPredicted RBP21.82■■□□□ 1.08
SNCAIP-222ENST00000542191 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
SNCAIP-222ENST00000542191 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
SNCAIP-222ENST00000542191 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
SNCAIP-222ENST00000542191 EEA1Q15075 1411 aa21.74■■□□□ 1.07
SNCAIP-222ENST00000542191 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
SNCAIP-222ENST00000542191 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
SNCAIP-222ENST00000542191 TNIKQ9UKE5 1360 aa21.71■■□□□ 1.07
SNCAIP-222ENST00000542191 CUX2O14529 1486 aa21.71■■□□□ 1.07
SNCAIP-222ENST00000542191 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
SNCAIP-222ENST00000542191 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
SNCAIP-222ENST00000542191 KIF27Q86VH2 1401 aa21.64■■□□□ 1.05
SNCAIP-222ENST00000542191 HRCP23327 699 aa21.6■■□□□ 1.05
SNCAIP-222ENST00000542191 CLIP1P30622 1438 aa21.6■■□□□ 1.05
SNCAIP-222ENST00000542191 P3H3Q8IVL6 736 aa21.57■■□□□ 1.04
SNCAIP-222ENST00000542191 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
SNCAIP-222ENST00000542191 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
SNCAIP-222ENST00000542191 KIF21BO75037 1637 aa21.56■■□□□ 1.04
SNCAIP-222ENST00000542191 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
SNCAIP-222ENST00000542191 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
SNCAIP-222ENST00000542191 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
SNCAIP-222ENST00000542191 IGF1RP08069 1367 aa21.52■■□□□ 1.04
SNCAIP-222ENST00000542191 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
SNCAIP-222ENST00000542191 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
SNCAIP-222ENST00000542191 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
SNCAIP-222ENST00000542191 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
SNCAIP-222ENST00000542191 CARMIL1Q5VZK9 1371 aa21.45■■□□□ 1.02
SNCAIP-222ENST00000542191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
SNCAIP-222ENST00000542191 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
SNCAIP-222ENST00000542191 APLP2Q06481 763 aa21.39■■□□□ 1.01
SNCAIP-222ENST00000542191 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
SNCAIP-222ENST00000542191 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
SNCAIP-222ENST00000542191 KANK4Q5T7N3 995 aaPredicted RBP21.32■■□□□ 1
SNCAIP-222ENST00000542191 AQRO60306 1485 aaKnown RBP eCLIP21.31■■□□□ 1
SNCAIP-222ENST00000542191 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
SNCAIP-222ENST00000542191 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
SNCAIP-222ENST00000542191 ERCC6Q03468 1493 aa21.3■■□□□ 1
SNCAIP-222ENST00000542191 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
SNCAIP-222ENST00000542191 ARHGAP35Q9NRY4 1499 aa21.24■□□□□ 0.99
SNCAIP-222ENST00000542191 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
SNCAIP-222ENST00000542191 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
SNCAIP-222ENST00000542191 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
SNCAIP-222ENST00000542191 ITGAEP38570 1179 aa21.2■□□□□ 0.98
SNCAIP-222ENST00000542191 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
SNCAIP-222ENST00000542191 FBLN2P98095 1184 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms