RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
CNTD1-204ENST00000588408 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
CNTD1-204ENST00000588408 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
CNTD1-204ENST00000588408 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
CNTD1-204ENST00000588408 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
CNTD1-204ENST00000588408 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
CNTD1-204ENST00000588408 DCAF1Q9Y4B6 1507 aa24.31■■□□□ 1.48
CNTD1-204ENST00000588408 ABCC9O60706 1549 aa23.79■■□□□ 1.4
CNTD1-204ENST00000588408 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
CNTD1-204ENST00000588408 MYO15BQ96JP2 1530 aa23.7■■□□□ 1.38
CNTD1-204ENST00000588408 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
CNTD1-204ENST00000588408 NACADO15069 1562 aa23.5■■□□□ 1.35
CNTD1-204ENST00000588408 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
CNTD1-204ENST00000588408 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
CNTD1-204ENST00000588408 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
CNTD1-204ENST00000588408 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
CNTD1-204ENST00000588408 WIZO95785 1651 aa22.99■■□□□ 1.27
CNTD1-204ENST00000588408 UNC13AQ9UPW8 1703 aa22.98■■□□□ 1.27
CNTD1-204ENST00000588408 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
CNTD1-204ENST00000588408 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
CNTD1-204ENST00000588408 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
CNTD1-204ENST00000588408 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
CNTD1-204ENST00000588408 SMARCA4P51532 1647 aa22.69■■□□□ 1.22
CNTD1-204ENST00000588408 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
CNTD1-204ENST00000588408 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
CNTD1-204ENST00000588408 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
CNTD1-204ENST00000588408 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
CNTD1-204ENST00000588408 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
CNTD1-204ENST00000588408 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
CNTD1-204ENST00000588408 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
CNTD1-204ENST00000588408 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
CNTD1-204ENST00000588408 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
CNTD1-204ENST00000588408 HRCP23327 699 aa22.34■■□□□ 1.17
CNTD1-204ENST00000588408 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
CNTD1-204ENST00000588408 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
CNTD1-204ENST00000588408 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
CNTD1-204ENST00000588408 SOGA1O94964 1423 aa22.07■■□□□ 1.12
CNTD1-204ENST00000588408 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
CNTD1-204ENST00000588408 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
CNTD1-204ENST00000588408 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
CNTD1-204ENST00000588408 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
CNTD1-204ENST00000588408 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
CNTD1-204ENST00000588408 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
CNTD1-204ENST00000588408 EEA1Q15075 1411 aa21.77■■□□□ 1.08
CNTD1-204ENST00000588408 CEP162Q5TB80 1403 aa21.77■■□□□ 1.08
CNTD1-204ENST00000588408 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
CNTD1-204ENST00000588408 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
CNTD1-204ENST00000588408 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
CNTD1-204ENST00000588408 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
CNTD1-204ENST00000588408 GOLGA3Q08378 1498 aa21.67■■□□□ 1.06
CNTD1-204ENST00000588408 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
CNTD1-204ENST00000588408 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
CNTD1-204ENST00000588408 KIF21BO75037 1637 aa21.58■■□□□ 1.04
CNTD1-204ENST00000588408 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
CNTD1-204ENST00000588408 CEP164Q9UPV0 1460 aa21.57■■□□□ 1.04
CNTD1-204ENST00000588408 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
CNTD1-204ENST00000588408 CUX1P39880 1505 aa21.52■■□□□ 1.04
CNTD1-204ENST00000588408 CFTRP13569 1480 aa21.51■■□□□ 1.03
CNTD1-204ENST00000588408 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
CNTD1-204ENST00000588408 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
CNTD1-204ENST00000588408 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
CNTD1-204ENST00000588408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
CNTD1-204ENST00000588408 CLIP1P30622 1438 aa21.42■■□□□ 1.02
CNTD1-204ENST00000588408 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
CNTD1-204ENST00000588408 PRXQ9BXM0 1461 aa21.32■■□□□ 1
CNTD1-204ENST00000588408 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
CNTD1-204ENST00000588408 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
CNTD1-204ENST00000588408 VPS8Q8N3P4 1428 aa21.28■■□□□ 1
CNTD1-204ENST00000588408 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
CNTD1-204ENST00000588408 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
CNTD1-204ENST00000588408 CUX2O14529 1486 aa21.17■□□□□ 0.98
CNTD1-204ENST00000588408 FGD5Q6ZNL6 1462 aa21.17■□□□□ 0.98
CNTD1-204ENST00000588408 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
CNTD1-204ENST00000588408 NESP48681 1621 aa21.15■□□□□ 0.98
CNTD1-204ENST00000588408 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
CNTD1-204ENST00000588408 APLP2Q06481 763 aa21.1■□□□□ 0.97
CNTD1-204ENST00000588408 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
CNTD1-204ENST00000588408 IGF1RP08069 1367 aa21.1■□□□□ 0.97
CNTD1-204ENST00000588408 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
CNTD1-204ENST00000588408 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
CNTD1-204ENST00000588408 KANK4Q5T7N3 995 aaPredicted RBP21.02■□□□□ 0.96
CNTD1-204ENST00000588408 RAD54L2Q9Y4B4 1467 aa21.02■□□□□ 0.95
CNTD1-204ENST00000588408 CARMIL1Q5VZK9 1371 aa20.99■□□□□ 0.95
CNTD1-204ENST00000588408 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
CNTD1-204ENST00000588408 TOPBP1Q92547 1522 aa20.97■□□□□ 0.95
CNTD1-204ENST00000588408 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
CNTD1-204ENST00000588408 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
CNTD1-204ENST00000588408 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
CNTD1-204ENST00000588408 LAMC3Q9Y6N6 1575 aa20.87■□□□□ 0.93
CNTD1-204ENST00000588408 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
CNTD1-204ENST00000588408 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
CNTD1-204ENST00000588408 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
CNTD1-204ENST00000588408 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
CNTD1-204ENST00000588408 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
CNTD1-204ENST00000588408 TIAM1Q13009 1591 aa20.73■□□□□ 0.91
CNTD1-204ENST00000588408 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
CNTD1-204ENST00000588408 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
CNTD1-204ENST00000588408 CUL7Q14999 1698 aa20.72■□□□□ 0.91
CNTD1-204ENST00000588408 FHOD3Q2V2M9 1422 aa20.71■□□□□ 0.91
CNTD1-204ENST00000588408 PCF11O94913 1555 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms