RNA–Protein interactions for RNA: ENST00000253452.6

COX4I1-201, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX4I1, Length 708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-201ENST00000253452 NISCHQ9Y2I1 1504 aa35.9■■■■□ 3.34
COX4I1-201ENST00000253452 ABCC9O60706 1549 aa32.35■■■□□ 2.77
COX4I1-201ENST00000253452 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
COX4I1-201ENST00000253452 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
COX4I1-201ENST00000253452 NACADO15069 1562 aa30.54■■■□□ 2.48
COX4I1-201ENST00000253452 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
COX4I1-201ENST00000253452 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
COX4I1-201ENST00000253452 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
COX4I1-201ENST00000253452 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
COX4I1-201ENST00000253452 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
COX4I1-201ENST00000253452 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
COX4I1-201ENST00000253452 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
COX4I1-201ENST00000253452 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
COX4I1-201ENST00000253452 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
COX4I1-201ENST00000253452 SCRIBQ14160 1630 aa29.31■■■□□ 2.28
COX4I1-201ENST00000253452 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
COX4I1-201ENST00000253452 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
COX4I1-201ENST00000253452 EIF4G1Q04637 1599 aaKnown RBP29.11■■■□□ 2.25
COX4I1-201ENST00000253452 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
COX4I1-201ENST00000253452 DNAJC5Q9H3Z4 198 aa28.13■■■□□ 2.09
COX4I1-201ENST00000253452 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
COX4I1-201ENST00000253452 SMARCA2P51531 1590 aa28■■■□□ 2.07
COX4I1-201ENST00000253452 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
COX4I1-201ENST00000253452 CUX2O14529 1486 aa27.96■■■□□ 2.07
COX4I1-201ENST00000253452 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
COX4I1-201ENST00000253452 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
COX4I1-201ENST00000253452 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
COX4I1-201ENST00000253452 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
COX4I1-201ENST00000253452 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
COX4I1-201ENST00000253452 NESP48681 1621 aa27.73■■■□□ 2.03
COX4I1-201ENST00000253452 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
COX4I1-201ENST00000253452 LAMC3Q9Y6N6 1575 aa27.55■■■□□ 2
COX4I1-201ENST00000253452 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
COX4I1-201ENST00000253452 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
COX4I1-201ENST00000253452 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
COX4I1-201ENST00000253452 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
COX4I1-201ENST00000253452 WIZO95785 1651 aa27.24■■□□□ 1.95
COX4I1-201ENST00000253452 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
COX4I1-201ENST00000253452 WDR62O43379 1518 aa27.09■■□□□ 1.93
COX4I1-201ENST00000253452 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
COX4I1-201ENST00000253452 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
COX4I1-201ENST00000253452 CFTRP13569 1480 aa27.02■■□□□ 1.92
COX4I1-201ENST00000253452 FANCD2Q9BXW9 1451 aa27.02■■□□□ 1.92
COX4I1-201ENST00000253452 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
COX4I1-201ENST00000253452 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
COX4I1-201ENST00000253452 URB2Q14146 1524 aaKnown RBP26.77■■□□□ 1.88
COX4I1-201ENST00000253452 OSCARQ8IYS5 282 aa26.76■■□□□ 1.87
COX4I1-201ENST00000253452 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
COX4I1-201ENST00000253452 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
COX4I1-201ENST00000253452 PRDM2Q13029 1718 aa26.54■■□□□ 1.84
COX4I1-201ENST00000253452 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
COX4I1-201ENST00000253452 TOPBP1Q92547 1522 aa26.48■■□□□ 1.83
COX4I1-201ENST00000253452 ZNF608Q9ULD9 1512 aaPredicted RBP26.46■■□□□ 1.83
COX4I1-201ENST00000253452 DNMBPQ6XZF7 1577 aa26.35■■□□□ 1.81
COX4I1-201ENST00000253452 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
COX4I1-201ENST00000253452 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
COX4I1-201ENST00000253452 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
COX4I1-201ENST00000253452 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
COX4I1-201ENST00000253452 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.796e-9■■■■■ 43.9
COX4I1-201ENST00000253452 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
COX4I1-201ENST00000253452 ARHGEF11O15085 1522 aa26.2■■□□□ 1.79
COX4I1-201ENST00000253452 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
COX4I1-201ENST00000253452 SOGA1O94964 1423 aa26.14■■□□□ 1.78
COX4I1-201ENST00000253452 FBLN2P98095 1184 aa26.14■■□□□ 1.78
COX4I1-201ENST00000253452 RAD54L2Q9Y4B4 1467 aa26.11■■□□□ 1.77
COX4I1-201ENST00000253452 CYB5RLQ6IPT4 315 aa26.1■■□□□ 1.77
COX4I1-201ENST00000253452 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
COX4I1-201ENST00000253452 FGD5Q6ZNL6 1462 aa26.02■■□□□ 1.76
COX4I1-201ENST00000253452 CHD1O14646 1710 aa26.02■■□□□ 1.76
COX4I1-201ENST00000253452 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
COX4I1-201ENST00000253452 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
COX4I1-201ENST00000253452 CUX1P39880 1505 aa25.96■■□□□ 1.75
COX4I1-201ENST00000253452 SNAPC4Q5SXM2 1469 aa25.94■■□□□ 1.74
COX4I1-201ENST00000253452 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
COX4I1-201ENST00000253452 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
COX4I1-201ENST00000253452 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
COX4I1-201ENST00000253452 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
COX4I1-201ENST00000253452 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
COX4I1-201ENST00000253452 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
COX4I1-201ENST00000253452 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
COX4I1-201ENST00000253452 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
COX4I1-201ENST00000253452 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
COX4I1-201ENST00000253452 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
COX4I1-201ENST00000253452 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.71e-6■□□□□ 10.2
COX4I1-201ENST00000253452 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
COX4I1-201ENST00000253452 PBRM1Q86U86 1689 aa25.64■■□□□ 1.69
COX4I1-201ENST00000253452 GRIN2AQ12879 1464 aa25.55■■□□□ 1.68
COX4I1-201ENST00000253452 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
COX4I1-201ENST00000253452 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
COX4I1-201ENST00000253452 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
COX4I1-201ENST00000253452 NUP160Q12769 1436 aa25.48■■□□□ 1.67
COX4I1-201ENST00000253452 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
COX4I1-201ENST00000253452 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
COX4I1-201ENST00000253452 CEP170Q5SW79 1584 aa25.4■■□□□ 1.66
COX4I1-201ENST00000253452 ERCC6L2Q5T890 1561 aa25.37■■□□□ 1.65
COX4I1-201ENST00000253452 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
COX4I1-201ENST00000253452 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
COX4I1-201ENST00000253452 PRG4Q92954 1404 aaPredicted RBP25.26■■□□□ 1.63
COX4I1-201ENST00000253452 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
COX4I1-201ENST00000253452 IGF1RP08069 1367 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms