RNA–Protein interactions for RNA: ENST00000269881.7

CALR3-201, Transcript of calreticulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR3, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3-201ENST00000269881 NISCHQ9Y2I1 1504 aa33.96■■■■□ 3.03
CALR3-201ENST00000269881 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
CALR3-201ENST00000269881 ABCC9O60706 1549 aa29.76■■■□□ 2.35
CALR3-201ENST00000269881 RB1CC1Q8TDY2 1594 aa28.63■■■□□ 2.17
CALR3-201ENST00000269881 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
CALR3-201ENST00000269881 NACADO15069 1562 aa28.53■■■□□ 2.16
CALR3-201ENST00000269881 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
CALR3-201ENST00000269881 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
CALR3-201ENST00000269881 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
CALR3-201ENST00000269881 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
CALR3-201ENST00000269881 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
CALR3-201ENST00000269881 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
CALR3-201ENST00000269881 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
CALR3-201ENST00000269881 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
CALR3-201ENST00000269881 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
CALR3-201ENST00000269881 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
CALR3-201ENST00000269881 CC2D2AQ9P2K1 1620 aa26.89■■□□□ 1.9
CALR3-201ENST00000269881 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
CALR3-201ENST00000269881 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
CALR3-201ENST00000269881 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
CALR3-201ENST00000269881 SMARCA4P51532 1647 aa26.39■■□□□ 1.82
CALR3-201ENST00000269881 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
CALR3-201ENST00000269881 NCAPD3P42695 1498 aa26.26■■□□□ 1.79
CALR3-201ENST00000269881 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
CALR3-201ENST00000269881 HMGXB3Q12766 1538 aa26.16■■□□□ 1.78
CALR3-201ENST00000269881 MROH2BQ7Z745 1585 aa26.13■■□□□ 1.77
CALR3-201ENST00000269881 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
CALR3-201ENST00000269881 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
CALR3-201ENST00000269881 WIZO95785 1651 aa25.88■■□□□ 1.73
CALR3-201ENST00000269881 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
CALR3-201ENST00000269881 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
CALR3-201ENST00000269881 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
CALR3-201ENST00000269881 NESP48681 1621 aa25.65■■□□□ 1.7
CALR3-201ENST00000269881 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
CALR3-201ENST00000269881 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
CALR3-201ENST00000269881 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
CALR3-201ENST00000269881 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
CALR3-201ENST00000269881 CUX2O14529 1486 aa25.47■■□□□ 1.67
CALR3-201ENST00000269881 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.66
CALR3-201ENST00000269881 CFTRP13569 1480 aa25.33■■□□□ 1.65
CALR3-201ENST00000269881 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
CALR3-201ENST00000269881 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
CALR3-201ENST00000269881 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
CALR3-201ENST00000269881 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
CALR3-201ENST00000269881 MRC2Q9UBG0 1479 aa25.24■■□□□ 1.63
CALR3-201ENST00000269881 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
CALR3-201ENST00000269881 PRDM2Q13029 1718 aa25.19■■□□□ 1.62
CALR3-201ENST00000269881 WDR62O43379 1518 aa25.12■■□□□ 1.61
CALR3-201ENST00000269881 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
CALR3-201ENST00000269881 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
CALR3-201ENST00000269881 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
CALR3-201ENST00000269881 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
CALR3-201ENST00000269881 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
CALR3-201ENST00000269881 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
CALR3-201ENST00000269881 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
CALR3-201ENST00000269881 CUX1P39880 1505 aa24.54■■□□□ 1.52
CALR3-201ENST00000269881 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
CALR3-201ENST00000269881 SOGA1O94964 1423 aa24.53■■□□□ 1.52
CALR3-201ENST00000269881 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
CALR3-201ENST00000269881 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
CALR3-201ENST00000269881 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
CALR3-201ENST00000269881 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
CALR3-201ENST00000269881 OSCARQ8IYS5 282 aa24.43■■□□□ 1.5
CALR3-201ENST00000269881 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
CALR3-201ENST00000269881 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
CALR3-201ENST00000269881 WDR97A6NE52 1622 aa24.42■■□□□ 1.5
CALR3-201ENST00000269881 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
CALR3-201ENST00000269881 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
CALR3-201ENST00000269881 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
CALR3-201ENST00000269881 FBLN2P98095 1184 aa24.32■■□□□ 1.48
CALR3-201ENST00000269881 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
CALR3-201ENST00000269881 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
CALR3-201ENST00000269881 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
CALR3-201ENST00000269881 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
CALR3-201ENST00000269881 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
CALR3-201ENST00000269881 CHD1O14646 1710 aa24.22■■□□□ 1.47
CALR3-201ENST00000269881 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
CALR3-201ENST00000269881 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
CALR3-201ENST00000269881 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
CALR3-201ENST00000269881 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
CALR3-201ENST00000269881 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
CALR3-201ENST00000269881 TRIM41Q8WV44 630 aa24.04■■□□□ 1.44
CALR3-201ENST00000269881 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
CALR3-201ENST00000269881 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
CALR3-201ENST00000269881 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
CALR3-201ENST00000269881 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
CALR3-201ENST00000269881 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
CALR3-201ENST00000269881 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
CALR3-201ENST00000269881 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
CALR3-201ENST00000269881 ARHGEF11O15085 1522 aa23.96■■□□□ 1.43
CALR3-201ENST00000269881 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
CALR3-201ENST00000269881 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
CALR3-201ENST00000269881 CUL7Q14999 1698 aa23.82■■□□□ 1.4
CALR3-201ENST00000269881 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
CALR3-201ENST00000269881 NUP160Q12769 1436 aa23.78■■□□□ 1.4
CALR3-201ENST00000269881 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
CALR3-201ENST00000269881 IGF1RP08069 1367 aa23.76■■□□□ 1.39
CALR3-201ENST00000269881 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
CALR3-201ENST00000269881 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
CALR3-201ENST00000269881 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms