RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
RAPGEF3-205ENST00000449771 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
RAPGEF3-205ENST00000449771 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
RAPGEF3-205ENST00000449771 NISCHQ9Y2I1 1504 aa22.54■■□□□ 1.2
RAPGEF3-205ENST00000449771 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.19
RAPGEF3-205ENST00000449771 APLP2Q06481 763 aa22.12■■□□□ 1.13
RAPGEF3-205ENST00000449771 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
RAPGEF3-205ENST00000449771 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
RAPGEF3-205ENST00000449771 MYT1Q01538 1121 aa21.85■■□□□ 1.09
RAPGEF3-205ENST00000449771 TTBK1Q5TCY1 1321 aaPredicted RBP21.73■■□□□ 1.07
RAPGEF3-205ENST00000449771 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-205ENST00000449771 ATP1B4Q9UN42 357 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-205ENST00000449771 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
RAPGEF3-205ENST00000449771 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
RAPGEF3-205ENST00000449771 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
RAPGEF3-205ENST00000449771 ERICH6Q7L0X2 663 aa21.13■□□□□ 0.97
RAPGEF3-205ENST00000449771 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
RAPGEF3-205ENST00000449771 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
RAPGEF3-205ENST00000449771 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
RAPGEF3-205ENST00000449771 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
RAPGEF3-205ENST00000449771 NEFLP07196 543 aa20.78■□□□□ 0.92
RAPGEF3-205ENST00000449771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
RAPGEF3-205ENST00000449771 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
RAPGEF3-205ENST00000449771 YTHDC1Q96MU7 727 aaKnown RBP20.71■□□□□ 0.91
RAPGEF3-205ENST00000449771 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.9
RAPGEF3-205ENST00000449771 ITGAEP38570 1179 aa20.56■□□□□ 0.88
RAPGEF3-205ENST00000449771 POLR3GLQ9BT43 218 aa20.56■□□□□ 0.88
RAPGEF3-205ENST00000449771 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
RAPGEF3-205ENST00000449771 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
RAPGEF3-205ENST00000449771 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
RAPGEF3-205ENST00000449771 DAXXQ9UER7 740 aaPredicted RBP20.31■□□□□ 0.84
RAPGEF3-205ENST00000449771 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
RAPGEF3-205ENST00000449771 HRCP23327 699 aa20.2■□□□□ 0.82
RAPGEF3-205ENST00000449771 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
RAPGEF3-205ENST00000449771 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.8
RAPGEF3-205ENST00000449771 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
RAPGEF3-205ENST00000449771 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
RAPGEF3-205ENST00000449771 ABCC9O60706 1549 aa19.91■□□□□ 0.78
RAPGEF3-205ENST00000449771 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
RAPGEF3-205ENST00000449771 FBLN2P98095 1184 aa19.87■□□□□ 0.77
RAPGEF3-205ENST00000449771 ZNF316A6NFI3 1004 aaPredicted RBP19.83■□□□□ 0.76
RAPGEF3-205ENST00000449771 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
RAPGEF3-205ENST00000449771 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
RAPGEF3-205ENST00000449771 BCANQ96GW7 911 aa19.69■□□□□ 0.74
RAPGEF3-205ENST00000449771 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
RAPGEF3-205ENST00000449771 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
RAPGEF3-205ENST00000449771 RTL5Q5HYW3 569 aaPredicted RBP19.65■□□□□ 0.74
RAPGEF3-205ENST00000449771 ZBTB47Q9UFB7 747 aaPredicted RBP19.63■□□□□ 0.73
RAPGEF3-205ENST00000449771 ARID3CA6NKF2 412 aa19.58■□□□□ 0.73
RAPGEF3-205ENST00000449771 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
RAPGEF3-205ENST00000449771 ANP32CO43423 234 aa19.53■□□□□ 0.72
RAPGEF3-205ENST00000449771 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
RAPGEF3-205ENST00000449771 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
RAPGEF3-205ENST00000449771 CANXP27824 592 aaKnown RBP19.49■□□□□ 0.71
RAPGEF3-205ENST00000449771 NEFMP07197 916 aa19.49■□□□□ 0.71
RAPGEF3-205ENST00000449771 ZNF777Q9ULD5 760 aaPredicted RBP19.46■□□□□ 0.71
RAPGEF3-205ENST00000449771 ESF1Q9H501 851 aaKnown RBP19.42■□□□□ 0.7
RAPGEF3-205ENST00000449771 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
RAPGEF3-205ENST00000449771 CDK11AQ9UQ88 783 aaPredicted RBP19.31■□□□□ 0.68
RAPGEF3-205ENST00000449771 STAG3Q9UJ98 1225 aa19.3■□□□□ 0.68
RAPGEF3-205ENST00000449771 CHGAP10645 457 aaKnown RBP19.27■□□□□ 0.68
RAPGEF3-205ENST00000449771 ACIN1Q9UKV3 1341 aaKnown RBP19.26■□□□□ 0.67
RAPGEF3-205ENST00000449771 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
RAPGEF3-205ENST00000449771 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
RAPGEF3-205ENST00000449771 EIF5BO60841 1220 aaKnown RBP19.18■□□□□ 0.66
RAPGEF3-205ENST00000449771 GLIPR1L2Q4G1C9 344 aa19.09■□□□□ 0.65
RAPGEF3-205ENST00000449771 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
RAPGEF3-205ENST00000449771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
RAPGEF3-205ENST00000449771 TONSLQ96HA7 1378 aa19.03■□□□□ 0.64
RAPGEF3-205ENST00000449771 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
RAPGEF3-205ENST00000449771 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
RAPGEF3-205ENST00000449771 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
RAPGEF3-205ENST00000449771 CHIC2Q9UKJ5 165 aa18.95■□□□□ 0.62
RAPGEF3-205ENST00000449771 HSP90AA1P07900 732 aaKnown RBP18.92■□□□□ 0.62
RAPGEF3-205ENST00000449771 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF3-205ENST00000449771 FAM9BQ8IZU0 186 aa18.89■□□□□ 0.61
RAPGEF3-205ENST00000449771 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF3-205ENST00000449771 A0A0G2JS52 829 aa18.87■□□□□ 0.61
RAPGEF3-205ENST00000449771 TSPY4P0CV99 314 aa18.86■□□□□ 0.61
RAPGEF3-205ENST00000449771 TSPY10P0CW01 314 aa18.86■□□□□ 0.61
RAPGEF3-205ENST00000449771 UPF2Q9HAU5 1272 aaKnown RBP18.85■□□□□ 0.61
RAPGEF3-205ENST00000449771 KDM2AQ9Y2K7 1162 aa18.84■□□□□ 0.61
RAPGEF3-205ENST00000449771 HNRNPUQ00839 825 aaKnown RBP eCLIP18.83■□□□□ 0.61
RAPGEF3-205ENST00000449771 ANP32BQ92688 251 aaKnown RBP18.83■□□□□ 0.6
RAPGEF3-205ENST00000449771 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
RAPGEF3-205ENST00000449771 WDR43Q15061 677 aaKnown RBP eCLIP18.81■□□□□ 0.6
RAPGEF3-205ENST00000449771 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
RAPGEF3-205ENST00000449771 FKBP8Q14318 412 aa18.79■□□□□ 0.6
RAPGEF3-205ENST00000449771 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
RAPGEF3-205ENST00000449771 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
RAPGEF3-205ENST00000449771 TMC1Q8TDI8 760 aa18.79■□□□□ 0.6
RAPGEF3-205ENST00000449771 MTUS2Q5JR59 1369 aa18.76■□□□□ 0.59
RAPGEF3-205ENST00000449771 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
RAPGEF3-205ENST00000449771 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
RAPGEF3-205ENST00000449771 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
RAPGEF3-205ENST00000449771 KCNH8Q96L42 1107 aa18.73■□□□□ 0.59
RAPGEF3-205ENST00000449771 ANP32EQ9BTT0 268 aa18.69■□□□□ 0.58
RAPGEF3-205ENST00000449771 MYH16Q9H6N6 1097 aa18.65■□□□□ 0.58
RAPGEF3-205ENST00000449771 ARID4BQ4LE39 1312 aaPredicted RBP18.65■□□□□ 0.58
RAPGEF3-205ENST00000449771 CCDC136Q96JN2 1154 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms