RNA–Protein interactions for RNA: ENST00000242249.8

RAMP3-201, Transcript of receptor activity modifying protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAMP3, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3-201ENST00000242249 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
RAMP3-201ENST00000242249 ABCC9O60706 1549 aa30.92■■■□□ 2.54
RAMP3-201ENST00000242249 CCDC180Q9P1Z9 1646 aa30.68■■■□□ 2.5
RAMP3-201ENST00000242249 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
RAMP3-201ENST00000242249 RB1CC1Q8TDY2 1594 aa29.27■■■□□ 2.28
RAMP3-201ENST00000242249 NACADO15069 1562 aa28.95■■■□□ 2.23
RAMP3-201ENST00000242249 DCAF8L2P0C7V8 631 aa28.91■■■□□ 2.22
RAMP3-201ENST00000242249 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
RAMP3-201ENST00000242249 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
RAMP3-201ENST00000242249 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
RAMP3-201ENST00000242249 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
RAMP3-201ENST00000242249 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
RAMP3-201ENST00000242249 DCAF1Q9Y4B6 1507 aa28.45■■■□□ 2.14
RAMP3-201ENST00000242249 SCRIBQ14160 1630 aa28■■■□□ 2.07
RAMP3-201ENST00000242249 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
RAMP3-201ENST00000242249 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
RAMP3-201ENST00000242249 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
RAMP3-201ENST00000242249 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
RAMP3-201ENST00000242249 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
RAMP3-201ENST00000242249 CUX2O14529 1486 aa26.83■■□□□ 1.89
RAMP3-201ENST00000242249 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
RAMP3-201ENST00000242249 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
RAMP3-201ENST00000242249 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.87
RAMP3-201ENST00000242249 NCAPD3P42695 1498 aa26.7■■□□□ 1.86
RAMP3-201ENST00000242249 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
RAMP3-201ENST00000242249 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
RAMP3-201ENST00000242249 HMGXB3Q12766 1538 aa26.52■■□□□ 1.84
RAMP3-201ENST00000242249 MROH2BQ7Z745 1585 aa26.52■■□□□ 1.84
RAMP3-201ENST00000242249 PEG3Q9GZU2 1588 aa26.47■■□□□ 1.83
RAMP3-201ENST00000242249 NESP48681 1621 aa26.46■■□□□ 1.83
RAMP3-201ENST00000242249 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
RAMP3-201ENST00000242249 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
RAMP3-201ENST00000242249 WIZO95785 1651 aa26.23■■□□□ 1.79
RAMP3-201ENST00000242249 LAMC3Q9Y6N6 1575 aa26.22■■□□□ 1.79
RAMP3-201ENST00000242249 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
RAMP3-201ENST00000242249 RSF1Q96T23 1441 aaPredicted RBP26.15■■□□□ 1.78
RAMP3-201ENST00000242249 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
RAMP3-201ENST00000242249 TOP2AP11388 1531 aaKnown RBP25.95■■□□□ 1.74
RAMP3-201ENST00000242249 CADPSQ9ULU8 1353 aa25.89■■□□□ 1.73
RAMP3-201ENST00000242249 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
RAMP3-201ENST00000242249 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
RAMP3-201ENST00000242249 WDR62O43379 1518 aa25.85■■□□□ 1.73
RAMP3-201ENST00000242249 CFTRP13569 1480 aa25.68■■□□□ 1.7
RAMP3-201ENST00000242249 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
RAMP3-201ENST00000242249 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
RAMP3-201ENST00000242249 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
RAMP3-201ENST00000242249 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
RAMP3-201ENST00000242249 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
RAMP3-201ENST00000242249 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
RAMP3-201ENST00000242249 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.66
RAMP3-201ENST00000242249 RIMBP3CA6NJZ7 1639 aa25.31■■□□□ 1.64
RAMP3-201ENST00000242249 RIMBP3BA6NNM3 1639 aa25.31■■□□□ 1.64
RAMP3-201ENST00000242249 RIMBP3Q9UFD9 1639 aa25.31■■□□□ 1.64
RAMP3-201ENST00000242249 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
RAMP3-201ENST00000242249 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
RAMP3-201ENST00000242249 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
RAMP3-201ENST00000242249 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
RAMP3-201ENST00000242249 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
RAMP3-201ENST00000242249 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
RAMP3-201ENST00000242249 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.6
RAMP3-201ENST00000242249 CHD1O14646 1710 aa25.01■■□□□ 1.59
RAMP3-201ENST00000242249 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
RAMP3-201ENST00000242249 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
RAMP3-201ENST00000242249 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
RAMP3-201ENST00000242249 CUX1P39880 1505 aa24.88■■□□□ 1.57
RAMP3-201ENST00000242249 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
RAMP3-201ENST00000242249 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.57
RAMP3-201ENST00000242249 FGD5Q6ZNL6 1462 aa24.85■■□□□ 1.57
RAMP3-201ENST00000242249 SOGA1O94964 1423 aa24.84■■□□□ 1.57
RAMP3-201ENST00000242249 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
RAMP3-201ENST00000242249 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
RAMP3-201ENST00000242249 FBLN2P98095 1184 aa24.73■■□□□ 1.55
RAMP3-201ENST00000242249 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
RAMP3-201ENST00000242249 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
RAMP3-201ENST00000242249 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
RAMP3-201ENST00000242249 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
RAMP3-201ENST00000242249 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
RAMP3-201ENST00000242249 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
RAMP3-201ENST00000242249 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
RAMP3-201ENST00000242249 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
RAMP3-201ENST00000242249 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
RAMP3-201ENST00000242249 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
RAMP3-201ENST00000242249 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
RAMP3-201ENST00000242249 MAGI1Q96QZ7 1491 aaPredicted RBP24.54■■□□□ 1.52
RAMP3-201ENST00000242249 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
RAMP3-201ENST00000242249 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
RAMP3-201ENST00000242249 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
RAMP3-201ENST00000242249 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
RAMP3-201ENST00000242249 AEBP2Q6ZN18 517 aaPredicted RBP24.34■■□□□ 1.49
RAMP3-201ENST00000242249 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
RAMP3-201ENST00000242249 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
RAMP3-201ENST00000242249 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
RAMP3-201ENST00000242249 GRIN2AQ12879 1464 aa24.25■■□□□ 1.47
RAMP3-201ENST00000242249 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
RAMP3-201ENST00000242249 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
RAMP3-201ENST00000242249 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
RAMP3-201ENST00000242249 NUP160Q12769 1436 aa24.12■■□□□ 1.45
RAMP3-201ENST00000242249 SHROOM2Q13796 1616 aa24.12■■□□□ 1.45
RAMP3-201ENST00000242249 KIF13AQ9H1H9 1805 aa24.09■■□□□ 1.45
RAMP3-201ENST00000242249 IGF1RP08069 1367 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms