RNA–Protein interactions for RNA: ENST00000585089.5

IFT20-214, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-214ENST00000585089 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
IFT20-214ENST00000585089 ABCC9O60706 1549 aa34.91■■■■□ 3.18
IFT20-214ENST00000585089 CCDC180Q9P1Z9 1646 aa34.22■■■■□ 3.07
IFT20-214ENST00000585089 DNAJC5BQ9UF47 199 aa33.37■■■□□ 2.93
IFT20-214ENST00000585089 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
IFT20-214ENST00000585089 NACADO15069 1562 aa32.52■■■□□ 2.8
IFT20-214ENST00000585089 PABPN1Q86U42 306 aaKnown RBP eCLIP32.37■■■□□ 2.77
IFT20-214ENST00000585089 DCAF8L2P0C7V8 631 aa32.2■■■□□ 2.75
IFT20-214ENST00000585089 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
IFT20-214ENST00000585089 BICRAQ9NZM4 1560 aa31.95■■■□□ 2.71
IFT20-214ENST00000585089 MYO15BQ96JP2 1530 aa31.79■■■□□ 2.68
IFT20-214ENST00000585089 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
IFT20-214ENST00000585089 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.63
IFT20-214ENST00000585089 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
IFT20-214ENST00000585089 DNAJC5Q9H3Z4 198 aa31.26■■■□□ 2.59
IFT20-214ENST00000585089 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
IFT20-214ENST00000585089 SCRIBQ14160 1630 aa31.1■■■□□ 2.57
IFT20-214ENST00000585089 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
IFT20-214ENST00000585089 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
IFT20-214ENST00000585089 CUX2O14529 1486 aa30.44■■■□□ 2.46
IFT20-214ENST00000585089 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
IFT20-214ENST00000585089 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
IFT20-214ENST00000585089 ATAD2BQ9ULI0 1458 aa29.79■■■□□ 2.36
IFT20-214ENST00000585089 NESP48681 1621 aa29.75■■■□□ 2.35
IFT20-214ENST00000585089 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
IFT20-214ENST00000585089 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
IFT20-214ENST00000585089 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
IFT20-214ENST00000585089 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
IFT20-214ENST00000585089 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
IFT20-214ENST00000585089 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
IFT20-214ENST00000585089 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
IFT20-214ENST00000585089 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
IFT20-214ENST00000585089 BAZ1AQ9NRL2 1556 aaPredicted RBP29.34■■■□□ 2.29
IFT20-214ENST00000585089 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
IFT20-214ENST00000585089 PEG3Q9GZU2 1588 aa29.29■■■□□ 2.28
IFT20-214ENST00000585089 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
IFT20-214ENST00000585089 WDR62O43379 1518 aa29.05■■■□□ 2.24
IFT20-214ENST00000585089 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
IFT20-214ENST00000585089 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
IFT20-214ENST00000585089 OSCARQ8IYS5 282 aa28.92■■■□□ 2.22
IFT20-214ENST00000585089 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
IFT20-214ENST00000585089 FANCD2Q9BXW9 1451 aa28.73■■■□□ 2.19
IFT20-214ENST00000585089 WIZO95785 1651 aa28.67■■■□□ 2.18
IFT20-214ENST00000585089 RIMBP3CA6NJZ7 1639 aa28.62■■■□□ 2.17
IFT20-214ENST00000585089 RIMBP3BA6NNM3 1639 aa28.62■■■□□ 2.17
IFT20-214ENST00000585089 RIMBP3Q9UFD9 1639 aa28.62■■■□□ 2.17
IFT20-214ENST00000585089 CFTRP13569 1480 aa28.55■■■□□ 2.16
IFT20-214ENST00000585089 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
IFT20-214ENST00000585089 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
IFT20-214ENST00000585089 IFT140Q96RY7 1462 aa28.3■■■□□ 2.12
IFT20-214ENST00000585089 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
IFT20-214ENST00000585089 ZNF608Q9ULD9 1512 aaPredicted RBP28.29■■■□□ 2.12
IFT20-214ENST00000585089 CYB5RLQ6IPT4 315 aa28.29■■■□□ 2.12
IFT20-214ENST00000585089 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
IFT20-214ENST00000585089 TRHP20396 242 aaPredicted RBP28.25■■■□□ 2.11
IFT20-214ENST00000585089 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
IFT20-214ENST00000585089 EIF4G3O43432 1585 aaKnown RBP28.13■■■□□ 2.09
IFT20-214ENST00000585089 CHD1O14646 1710 aa28.1■■■□□ 2.09
IFT20-214ENST00000585089 TOPBP1Q92547 1522 aa28.1■■■□□ 2.09
IFT20-214ENST00000585089 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
IFT20-214ENST00000585089 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
IFT20-214ENST00000585089 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
IFT20-214ENST00000585089 FBLN2P98095 1184 aa27.97■■■□□ 2.07
IFT20-214ENST00000585089 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.06
IFT20-214ENST00000585089 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
IFT20-214ENST00000585089 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
IFT20-214ENST00000585089 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
IFT20-214ENST00000585089 POLA1P09884 1462 aaPredicted RBP27.76■■■□□ 2.03
IFT20-214ENST00000585089 CLASP1Q7Z460 1538 aa27.71■■■□□ 2.03
IFT20-214ENST00000585089 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
IFT20-214ENST00000585089 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
IFT20-214ENST00000585089 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
IFT20-214ENST00000585089 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
IFT20-214ENST00000585089 CHMP7Q8WUX9 453 aaPredicted RBP27.64■■■□□ 2.02
IFT20-214ENST00000585089 SOGA1O94964 1423 aa27.63■■■□□ 2.01
IFT20-214ENST00000585089 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
IFT20-214ENST00000585089 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
IFT20-214ENST00000585089 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
IFT20-214ENST00000585089 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
IFT20-214ENST00000585089 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
IFT20-214ENST00000585089 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
IFT20-214ENST00000585089 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
IFT20-214ENST00000585089 CUX1P39880 1505 aa27.32■■□□□ 1.96
IFT20-214ENST00000585089 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
IFT20-214ENST00000585089 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
IFT20-214ENST00000585089 KIF13AQ9H1H9 1805 aa27.13■■□□□ 1.93
IFT20-214ENST00000585089 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
IFT20-214ENST00000585089 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
IFT20-214ENST00000585089 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
IFT20-214ENST00000585089 NUP160Q12769 1436 aa27.05■■□□□ 1.92
IFT20-214ENST00000585089 SHROOM2Q13796 1616 aa27.04■■□□□ 1.92
IFT20-214ENST00000585089 ADAMTS12P58397 1594 aa27.01■■□□□ 1.92
IFT20-214ENST00000585089 FHAD1B1AJZ9 1412 aa26.91■■□□□ 1.9
IFT20-214ENST00000585089 FAM69CQ0P6D2 419 aa26.89■■□□□ 1.9
IFT20-214ENST00000585089 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.89
IFT20-214ENST00000585089 PRG4Q92954 1404 aaPredicted RBP26.87■■□□□ 1.89
IFT20-214ENST00000585089 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
IFT20-214ENST00000585089 NPM1P06748 294 aaKnown RBP eCLIP26.84■■□□□ 1.89
IFT20-214ENST00000585089 ILDR1Q86SU0 546 aaPredicted RBP26.81■■□□□ 1.88
IFT20-214ENST00000585089 KDM4FA0A1W2PPD8 638 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms