RNA–Protein interactions for RNA: ENST00000273077.8

PNKD-203, Transcript of PNKD, MBL domain containing, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PNKD, Length 3,021 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-203ENST00000273077 NISCHQ9Y2I1 1504 aa28.82■■■□□ 2.2
PNKD-203ENST00000273077 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
PNKD-203ENST00000273077 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
PNKD-203ENST00000273077 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
PNKD-203ENST00000273077 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.48
PNKD-203ENST00000273077 CCDC180Q9P1Z9 1646 aa24.3■■□□□ 1.48
PNKD-203ENST00000273077 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
PNKD-203ENST00000273077 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
PNKD-203ENST00000273077 DCAF1Q9Y4B6 1507 aa23.37■■□□□ 1.33
PNKD-203ENST00000273077 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
PNKD-203ENST00000273077 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
PNKD-203ENST00000273077 ABCC9O60706 1549 aa23.09■■□□□ 1.29
PNKD-203ENST00000273077 PCGF6Q9BYE7 350 aa22.97■■□□□ 1.27
PNKD-203ENST00000273077 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
PNKD-203ENST00000273077 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
PNKD-203ENST00000273077 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
PNKD-203ENST00000273077 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
PNKD-203ENST00000273077 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
PNKD-203ENST00000273077 HRCP23327 699 aa22.69■■□□□ 1.22
PNKD-203ENST00000273077 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
PNKD-203ENST00000273077 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
PNKD-203ENST00000273077 NACADO15069 1562 aa22.56■■□□□ 1.2
PNKD-203ENST00000273077 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
PNKD-203ENST00000273077 WIZO95785 1651 aa22.43■■□□□ 1.18
PNKD-203ENST00000273077 PELP1Q8IZL8 1130 aaKnown RBP22.32■■□□□ 1.16
PNKD-203ENST00000273077 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
PNKD-203ENST00000273077 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
PNKD-203ENST00000273077 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
PNKD-203ENST00000273077 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
PNKD-203ENST00000273077 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
PNKD-203ENST00000273077 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
PNKD-203ENST00000273077 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
PNKD-203ENST00000273077 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
PNKD-203ENST00000273077 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
PNKD-203ENST00000273077 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
PNKD-203ENST00000273077 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
PNKD-203ENST00000273077 SOGA1O94964 1423 aa21.79■■□□□ 1.08
PNKD-203ENST00000273077 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
PNKD-203ENST00000273077 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
PNKD-203ENST00000273077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
PNKD-203ENST00000273077 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
PNKD-203ENST00000273077 MYT1Q01538 1121 aa21.65■■□□□ 1.06
PNKD-203ENST00000273077 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
PNKD-203ENST00000273077 RANGAP1P46060 587 aaPredicted RBP21.58■■□□□ 1.05
PNKD-203ENST00000273077 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.04
PNKD-203ENST00000273077 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
PNKD-203ENST00000273077 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
PNKD-203ENST00000273077 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
PNKD-203ENST00000273077 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
PNKD-203ENST00000273077 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
PNKD-203ENST00000273077 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
PNKD-203ENST00000273077 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
PNKD-203ENST00000273077 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
PNKD-203ENST00000273077 GOLGA3Q08378 1498 aa21.32■■□□□ 1
PNKD-203ENST00000273077 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
PNKD-203ENST00000273077 EEA1Q15075 1411 aa21.3■■□□□ 1
PNKD-203ENST00000273077 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
PNKD-203ENST00000273077 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
PNKD-203ENST00000273077 CEP164Q9UPV0 1460 aa21.18■□□□□ 0.98
PNKD-203ENST00000273077 CLIP1P30622 1438 aa21.18■□□□□ 0.98
PNKD-203ENST00000273077 APLP2Q06481 763 aa21.07■□□□□ 0.96
PNKD-203ENST00000273077 KIF21BO75037 1637 aa21.06■□□□□ 0.96
PNKD-203ENST00000273077 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
PNKD-203ENST00000273077 DIEXFQ68CQ4 756 aaKnown RBP21■□□□□ 0.95
PNKD-203ENST00000273077 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
PNKD-203ENST00000273077 CUX1P39880 1505 aa20.95■□□□□ 0.94
PNKD-203ENST00000273077 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
PNKD-203ENST00000273077 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.93
PNKD-203ENST00000273077 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
PNKD-203ENST00000273077 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
PNKD-203ENST00000273077 NEUROD1Q13562 356 aa20.83■□□□□ 0.93
PNKD-203ENST00000273077 PRXQ9BXM0 1461 aa20.83■□□□□ 0.92
PNKD-203ENST00000273077 CFTRP13569 1480 aa20.81■□□□□ 0.92
PNKD-203ENST00000273077 ITGAEP38570 1179 aa20.81■□□□□ 0.92
PNKD-203ENST00000273077 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
PNKD-203ENST00000273077 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
PNKD-203ENST00000273077 ZNF316A6NFI3 1004 aaPredicted RBP20.78■□□□□ 0.92
PNKD-203ENST00000273077 YTHDC1Q96MU7 727 aaKnown RBP20.78■□□□□ 0.92
PNKD-203ENST00000273077 CUX2O14529 1486 aa20.74■□□□□ 0.91
PNKD-203ENST00000273077 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
PNKD-203ENST00000273077 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
PNKD-203ENST00000273077 ACIN1Q9UKV3 1341 aaKnown RBP20.71■□□□□ 0.91
PNKD-203ENST00000273077 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
PNKD-203ENST00000273077 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
PNKD-203ENST00000273077 ARHGAP35Q9NRY4 1499 aa20.64■□□□□ 0.9
PNKD-203ENST00000273077 IGF1RP08069 1367 aa20.63■□□□□ 0.89
PNKD-203ENST00000273077 MIER1Q8N108 512 aa20.62■□□□□ 0.89
PNKD-203ENST00000273077 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
PNKD-203ENST00000273077 GTF3C3Q9Y5Q9 886 aa20.61■□□□□ 0.89
PNKD-203ENST00000273077 CC2D2AQ9P2K1 1620 aa20.61■□□□□ 0.89
PNKD-203ENST00000273077 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
PNKD-203ENST00000273077 NESP48681 1621 aa20.56■□□□□ 0.88
PNKD-203ENST00000273077 CENPBP07199 599 aaPredicted RBP20.55■□□□□ 0.88
PNKD-203ENST00000273077 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
PNKD-203ENST00000273077 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
PNKD-203ENST00000273077 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
PNKD-203ENST00000273077 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
PNKD-203ENST00000273077 CCNB3Q8WWL7 1395 aa20.48■□□□□ 0.87
PNKD-203ENST00000273077 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
PNKD-203ENST00000273077 FAM50AQ14320 339 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms