RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
ERCC4-207ENST00000575156 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
ERCC4-207ENST00000575156 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
ERCC4-207ENST00000575156 ABCC9O60706 1549 aa26.54■■□□□ 1.84
ERCC4-207ENST00000575156 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
ERCC4-207ENST00000575156 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
ERCC4-207ENST00000575156 MYO15BQ96JP2 1530 aa25.95■■□□□ 1.75
ERCC4-207ENST00000575156 SHROOM4Q9ULL8 1493 aa25.9■■□□□ 1.74
ERCC4-207ENST00000575156 NACADO15069 1562 aa25.89■■□□□ 1.74
ERCC4-207ENST00000575156 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
ERCC4-207ENST00000575156 SCRIBQ14160 1630 aa25.58■■□□□ 1.68
ERCC4-207ENST00000575156 UNC13AQ9UPW8 1703 aa25.22■■□□□ 1.63
ERCC4-207ENST00000575156 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
ERCC4-207ENST00000575156 BICRAQ9NZM4 1560 aa25.02■■□□□ 1.6
ERCC4-207ENST00000575156 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
ERCC4-207ENST00000575156 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
ERCC4-207ENST00000575156 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
ERCC4-207ENST00000575156 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
ERCC4-207ENST00000575156 BAZ1AQ9NRL2 1556 aaPredicted RBP24.52■■□□□ 1.52
ERCC4-207ENST00000575156 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
ERCC4-207ENST00000575156 WIZO95785 1651 aa24.35■■□□□ 1.49
ERCC4-207ENST00000575156 EIF4G1Q04637 1599 aaKnown RBP24.26■■□□□ 1.47
ERCC4-207ENST00000575156 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.46
ERCC4-207ENST00000575156 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
ERCC4-207ENST00000575156 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
ERCC4-207ENST00000575156 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
ERCC4-207ENST00000575156 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
ERCC4-207ENST00000575156 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
ERCC4-207ENST00000575156 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
ERCC4-207ENST00000575156 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
ERCC4-207ENST00000575156 HMGXB3Q12766 1538 aa23.85■■□□□ 1.41
ERCC4-207ENST00000575156 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
ERCC4-207ENST00000575156 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
ERCC4-207ENST00000575156 CFTRP13569 1480 aa23.36■■□□□ 1.33
ERCC4-207ENST00000575156 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
ERCC4-207ENST00000575156 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
ERCC4-207ENST00000575156 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
ERCC4-207ENST00000575156 NESP48681 1621 aa23.26■■□□□ 1.31
ERCC4-207ENST00000575156 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
ERCC4-207ENST00000575156 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
ERCC4-207ENST00000575156 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
ERCC4-207ENST00000575156 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
ERCC4-207ENST00000575156 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.28
ERCC4-207ENST00000575156 CUX1P39880 1505 aa22.99■■□□□ 1.27
ERCC4-207ENST00000575156 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
ERCC4-207ENST00000575156 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
ERCC4-207ENST00000575156 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
ERCC4-207ENST00000575156 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
ERCC4-207ENST00000575156 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
ERCC4-207ENST00000575156 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
ERCC4-207ENST00000575156 SOGA1O94964 1423 aa22.85■■□□□ 1.25
ERCC4-207ENST00000575156 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
ERCC4-207ENST00000575156 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
ERCC4-207ENST00000575156 RUSC2Q8N2Y8 1516 aa22.79■■□□□ 1.24
ERCC4-207ENST00000575156 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
ERCC4-207ENST00000575156 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
ERCC4-207ENST00000575156 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
ERCC4-207ENST00000575156 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
ERCC4-207ENST00000575156 MRC2Q9UBG0 1479 aa22.7■■□□□ 1.22
ERCC4-207ENST00000575156 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
ERCC4-207ENST00000575156 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
ERCC4-207ENST00000575156 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
ERCC4-207ENST00000575156 EEA1Q15075 1411 aa22.63■■□□□ 1.21
ERCC4-207ENST00000575156 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
ERCC4-207ENST00000575156 CUX2O14529 1486 aa22.58■■□□□ 1.21
ERCC4-207ENST00000575156 WDR62O43379 1518 aa22.58■■□□□ 1.21
ERCC4-207ENST00000575156 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
ERCC4-207ENST00000575156 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
ERCC4-207ENST00000575156 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
ERCC4-207ENST00000575156 TARBP1Q13395 1621 aaKnown RBP22.47■■□□□ 1.19
ERCC4-207ENST00000575156 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.19
ERCC4-207ENST00000575156 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
ERCC4-207ENST00000575156 IGF1RP08069 1367 aa22.43■■□□□ 1.18
ERCC4-207ENST00000575156 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
ERCC4-207ENST00000575156 PRXQ9BXM0 1461 aa22.38■■□□□ 1.17
ERCC4-207ENST00000575156 RAPGEF2Q9Y4G8 1499 aa22.38■■□□□ 1.17
ERCC4-207ENST00000575156 KIF21BO75037 1637 aa22.37■■□□□ 1.17
ERCC4-207ENST00000575156 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
ERCC4-207ENST00000575156 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
ERCC4-207ENST00000575156 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
ERCC4-207ENST00000575156 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
ERCC4-207ENST00000575156 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
ERCC4-207ENST00000575156 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
ERCC4-207ENST00000575156 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
ERCC4-207ENST00000575156 TNIKQ9UKE5 1360 aa22.26■■□□□ 1.15
ERCC4-207ENST00000575156 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
ERCC4-207ENST00000575156 EIF4G3O43432 1585 aaKnown RBP22.2■■□□□ 1.15
ERCC4-207ENST00000575156 GRIN2BQ13224 1484 aa22.19■■□□□ 1.14
ERCC4-207ENST00000575156 PBRM1Q86U86 1689 aa22.18■■□□□ 1.14
ERCC4-207ENST00000575156 CUL7Q14999 1698 aa22.17■■□□□ 1.14
ERCC4-207ENST00000575156 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
ERCC4-207ENST00000575156 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
ERCC4-207ENST00000575156 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
ERCC4-207ENST00000575156 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
ERCC4-207ENST00000575156 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
ERCC4-207ENST00000575156 CLIP1P30622 1438 aa22.02■■□□□ 1.12
ERCC4-207ENST00000575156 MAGI1Q96QZ7 1491 aaPredicted RBP22■■□□□ 1.11
ERCC4-207ENST00000575156 FBLN2P98095 1184 aa21.94■■□□□ 1.1
ERCC4-207ENST00000575156 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
ERCC4-207ENST00000575156 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms