RNA–Protein interactions for RNA: ENST00000591282.5

CELF4-217, Transcript of CUGBP Elav-like family member 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CELF4, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-217ENST00000591282 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
CELF4-217ENST00000591282 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
CELF4-217ENST00000591282 ABCC9O60706 1549 aa28.71■■■□□ 2.19
CELF4-217ENST00000591282 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
CELF4-217ENST00000591282 NACADO15069 1562 aa27.3■■□□□ 1.96
CELF4-217ENST00000591282 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
CELF4-217ENST00000591282 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
CELF4-217ENST00000591282 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
CELF4-217ENST00000591282 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
CELF4-217ENST00000591282 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
CELF4-217ENST00000591282 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
CELF4-217ENST00000591282 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
CELF4-217ENST00000591282 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
CELF4-217ENST00000591282 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
CELF4-217ENST00000591282 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.78
CELF4-217ENST00000591282 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
CELF4-217ENST00000591282 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
CELF4-217ENST00000591282 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
CELF4-217ENST00000591282 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
CELF4-217ENST00000591282 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
CELF4-217ENST00000591282 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
CELF4-217ENST00000591282 BAZ1AQ9NRL2 1556 aaPredicted RBP25.23■■□□□ 1.63
CELF4-217ENST00000591282 NCAPD3P42695 1498 aa25.17■■□□□ 1.62
CELF4-217ENST00000591282 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
CELF4-217ENST00000591282 HMGXB3Q12766 1538 aa25.08■■□□□ 1.61
CELF4-217ENST00000591282 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
CELF4-217ENST00000591282 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
CELF4-217ENST00000591282 WIZO95785 1651 aa25.04■■□□□ 1.6
CELF4-217ENST00000591282 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
CELF4-217ENST00000591282 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
CELF4-217ENST00000591282 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
CELF4-217ENST00000591282 NESP48681 1621 aa24.87■■□□□ 1.57
CELF4-217ENST00000591282 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
CELF4-217ENST00000591282 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
CELF4-217ENST00000591282 ERCC6Q03468 1493 aa24.63■■□□□ 1.53
CELF4-217ENST00000591282 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
CELF4-217ENST00000591282 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
CELF4-217ENST00000591282 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
CELF4-217ENST00000591282 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.49
CELF4-217ENST00000591282 CUX2O14529 1486 aa24.38■■□□□ 1.49
CELF4-217ENST00000591282 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
CELF4-217ENST00000591282 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
CELF4-217ENST00000591282 CFTRP13569 1480 aa24.28■■□□□ 1.48
CELF4-217ENST00000591282 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
CELF4-217ENST00000591282 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
CELF4-217ENST00000591282 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
CELF4-217ENST00000591282 WDR62O43379 1518 aa24.17■■□□□ 1.46
CELF4-217ENST00000591282 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
CELF4-217ENST00000591282 TOPBP1Q92547 1522 aa23.86■■□□□ 1.41
CELF4-217ENST00000591282 DNMBPQ6XZF7 1577 aa23.8■■□□□ 1.4
CELF4-217ENST00000591282 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
CELF4-217ENST00000591282 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
CELF4-217ENST00000591282 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
CELF4-217ENST00000591282 CUX1P39880 1505 aa23.67■■□□□ 1.38
CELF4-217ENST00000591282 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
CELF4-217ENST00000591282 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.38
CELF4-217ENST00000591282 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
CELF4-217ENST00000591282 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
CELF4-217ENST00000591282 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
CELF4-217ENST00000591282 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
CELF4-217ENST00000591282 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
CELF4-217ENST00000591282 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
CELF4-217ENST00000591282 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
CELF4-217ENST00000591282 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
CELF4-217ENST00000591282 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
CELF4-217ENST00000591282 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
CELF4-217ENST00000591282 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
CELF4-217ENST00000591282 CHD1O14646 1710 aa23.49■■□□□ 1.35
CELF4-217ENST00000591282 SOGA1O94964 1423 aa23.45■■□□□ 1.34
CELF4-217ENST00000591282 TDRD9Q8NDG6 1382 aaKnown RBP23.42■■□□□ 1.34
CELF4-217ENST00000591282 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
CELF4-217ENST00000591282 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
CELF4-217ENST00000591282 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
CELF4-217ENST00000591282 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
CELF4-217ENST00000591282 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
CELF4-217ENST00000591282 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
CELF4-217ENST00000591282 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
CELF4-217ENST00000591282 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
CELF4-217ENST00000591282 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
CELF4-217ENST00000591282 GRIN2BQ13224 1484 aa23.19■■□□□ 1.3
CELF4-217ENST00000591282 FBLN2P98095 1184 aa23.18■■□□□ 1.3
CELF4-217ENST00000591282 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
CELF4-217ENST00000591282 ARHGEF11O15085 1522 aa23.1■■□□□ 1.29
CELF4-217ENST00000591282 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
CELF4-217ENST00000591282 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.29
CELF4-217ENST00000591282 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.28
CELF4-217ENST00000591282 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
CELF4-217ENST00000591282 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
CELF4-217ENST00000591282 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
CELF4-217ENST00000591282 EEA1Q15075 1411 aa22.99■■□□□ 1.27
CELF4-217ENST00000591282 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
CELF4-217ENST00000591282 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
CELF4-217ENST00000591282 GRIN2AQ12879 1464 aa22.95■■□□□ 1.27
CELF4-217ENST00000591282 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
CELF4-217ENST00000591282 ARAP1Q96P48 1450 aa22.94■■□□□ 1.26
CELF4-217ENST00000591282 IGF1RP08069 1367 aa22.91■■□□□ 1.26
CELF4-217ENST00000591282 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
CELF4-217ENST00000591282 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
CELF4-217ENST00000591282 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
CELF4-217ENST00000591282 CUL7Q14999 1698 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms