RNA–Protein interactions for RNA: ENST00000383019.2

LINC02346-201, Transcript of long intergenic non-protein coding RNA 2346, humanhuman

TSL 2 BASIC

Gene LINC02346, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02346-201ENST00000383019 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
LINC02346-201ENST00000383019 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
LINC02346-201ENST00000383019 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
LINC02346-201ENST00000383019 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
LINC02346-201ENST00000383019 CCDC180Q9P1Z9 1646 aa23.73■■□□□ 1.39
LINC02346-201ENST00000383019 HRCP23327 699 aa23.72■■□□□ 1.39
LINC02346-201ENST00000383019 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
LINC02346-201ENST00000383019 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
LINC02346-201ENST00000383019 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
LINC02346-201ENST00000383019 PCGF6Q9BYE7 350 aa23.21■■□□□ 1.31
LINC02346-201ENST00000383019 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
LINC02346-201ENST00000383019 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
LINC02346-201ENST00000383019 DCAF8L2P0C7V8 631 aa22.74■■□□□ 1.23
LINC02346-201ENST00000383019 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
LINC02346-201ENST00000383019 ABCC9O60706 1549 aa22.63■■□□□ 1.21
LINC02346-201ENST00000383019 ZEB1P37275 1124 aaPredicted RBP22.61■■□□□ 1.21
LINC02346-201ENST00000383019 PELP1Q8IZL8 1130 aaKnown RBP22.51■■□□□ 1.19
LINC02346-201ENST00000383019 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
LINC02346-201ENST00000383019 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
LINC02346-201ENST00000383019 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
LINC02346-201ENST00000383019 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
LINC02346-201ENST00000383019 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
LINC02346-201ENST00000383019 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
LINC02346-201ENST00000383019 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
LINC02346-201ENST00000383019 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
LINC02346-201ENST00000383019 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
LINC02346-201ENST00000383019 NACADO15069 1562 aa21.75■■□□□ 1.07
LINC02346-201ENST00000383019 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
LINC02346-201ENST00000383019 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
LINC02346-201ENST00000383019 WIZO95785 1651 aa21.69■■□□□ 1.06
LINC02346-201ENST00000383019 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
LINC02346-201ENST00000383019 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
LINC02346-201ENST00000383019 NEUROD1Q13562 356 aa21.63■■□□□ 1.05
LINC02346-201ENST00000383019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.63■■□□□ 1.05
LINC02346-201ENST00000383019 MYT1Q01538 1121 aa21.61■■□□□ 1.05
LINC02346-201ENST00000383019 CENPBP07199 599 aaPredicted RBP21.6■■□□□ 1.05
LINC02346-201ENST00000383019 EHMT2Q96KQ7 1210 aa21.57■■□□□ 1.04
LINC02346-201ENST00000383019 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
LINC02346-201ENST00000383019 GTF3C3Q9Y5Q9 886 aa21.47■■□□□ 1.03
LINC02346-201ENST00000383019 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
LINC02346-201ENST00000383019 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
LINC02346-201ENST00000383019 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
LINC02346-201ENST00000383019 EEA1Q15075 1411 aa21.38■■□□□ 1.01
LINC02346-201ENST00000383019 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
LINC02346-201ENST00000383019 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
LINC02346-201ENST00000383019 ZNF316A6NFI3 1004 aaPredicted RBP21.31■■□□□ 1
LINC02346-201ENST00000383019 SMARCA2P51531 1590 aa21.3■■□□□ 1
LINC02346-201ENST00000383019 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
LINC02346-201ENST00000383019 SOGA1O94964 1423 aa21.21■□□□□ 0.99
LINC02346-201ENST00000383019 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
LINC02346-201ENST00000383019 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
LINC02346-201ENST00000383019 KIF21BO75037 1637 aa21.08■□□□□ 0.96
LINC02346-201ENST00000383019 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
LINC02346-201ENST00000383019 TTBK1Q5TCY1 1321 aaPredicted RBP21.07■□□□□ 0.96
LINC02346-201ENST00000383019 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
LINC02346-201ENST00000383019 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
LINC02346-201ENST00000383019 UNC13AQ9UPW8 1703 aa21■□□□□ 0.95
LINC02346-201ENST00000383019 MIER1Q8N108 512 aa20.99■□□□□ 0.95
LINC02346-201ENST00000383019 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
LINC02346-201ENST00000383019 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
LINC02346-201ENST00000383019 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
LINC02346-201ENST00000383019 CLSPNQ9HAW4 1339 aa20.92■□□□□ 0.94
LINC02346-201ENST00000383019 CLIP1P30622 1438 aa20.91■□□□□ 0.94
LINC02346-201ENST00000383019 PEG3Q9GZU2 1588 aa20.9■□□□□ 0.94
LINC02346-201ENST00000383019 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
LINC02346-201ENST00000383019 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
LINC02346-201ENST00000383019 APLP2Q06481 763 aa20.73■□□□□ 0.91
LINC02346-201ENST00000383019 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
LINC02346-201ENST00000383019 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
LINC02346-201ENST00000383019 BICRAQ9NZM4 1560 aa20.65■□□□□ 0.9
LINC02346-201ENST00000383019 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
LINC02346-201ENST00000383019 TOP2BQ02880 1626 aa20.63■□□□□ 0.89
LINC02346-201ENST00000383019 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
LINC02346-201ENST00000383019 CUX2O14529 1486 aa20.6■□□□□ 0.89
LINC02346-201ENST00000383019 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
LINC02346-201ENST00000383019 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
LINC02346-201ENST00000383019 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
LINC02346-201ENST00000383019 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
LINC02346-201ENST00000383019 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
LINC02346-201ENST00000383019 TSHZ2Q9NRE2 1034 aa20.42■□□□□ 0.86
LINC02346-201ENST00000383019 KANK4Q5T7N3 995 aaPredicted RBP20.37■□□□□ 0.85
LINC02346-201ENST00000383019 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
LINC02346-201ENST00000383019 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
LINC02346-201ENST00000383019 ANP32EQ9BTT0 268 aa20.34■□□□□ 0.85
LINC02346-201ENST00000383019 RANGAP1P46060 587 aaPredicted RBP20.31■□□□□ 0.84
LINC02346-201ENST00000383019 MAPKBP1O60336 1514 aa20.31■□□□□ 0.84
LINC02346-201ENST00000383019 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
LINC02346-201ENST00000383019 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
LINC02346-201ENST00000383019 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.84
LINC02346-201ENST00000383019 CUX1P39880 1505 aa20.24■□□□□ 0.83
LINC02346-201ENST00000383019 RAB3GAP2Q9H2M9 1393 aa20.22■□□□□ 0.83
LINC02346-201ENST00000383019 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
LINC02346-201ENST00000383019 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
LINC02346-201ENST00000383019 SETD5Q9C0A6 1442 aa20.16■□□□□ 0.82
LINC02346-201ENST00000383019 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
LINC02346-201ENST00000383019 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
LINC02346-201ENST00000383019 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
LINC02346-201ENST00000383019 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
LINC02346-201ENST00000383019 CFAP43Q8NDM7 1665 aa20.09■□□□□ 0.81
LINC02346-201ENST00000383019 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms