RNA–Protein interactions for RNA: ENST00000439844.2

AL391415.1-201, humanhuman

TSL 3 BASIC

Gene AL391415.1, Length 400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL391415.1-201ENST00000439844 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
AL391415.1-201ENST00000439844 AEBP2Q6ZN18 517 aaPredicted RBP31.46■■■□□ 2.63
AL391415.1-201ENST00000439844 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
AL391415.1-201ENST00000439844 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
AL391415.1-201ENST00000439844 ABCC9O60706 1549 aa29.25■■■□□ 2.27
AL391415.1-201ENST00000439844 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
AL391415.1-201ENST00000439844 NACADO15069 1562 aa28.16■■■□□ 2.1
AL391415.1-201ENST00000439844 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
AL391415.1-201ENST00000439844 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
AL391415.1-201ENST00000439844 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
AL391415.1-201ENST00000439844 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
AL391415.1-201ENST00000439844 UNC13AQ9UPW8 1703 aa27.65■■■□□ 2.02
AL391415.1-201ENST00000439844 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
AL391415.1-201ENST00000439844 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
AL391415.1-201ENST00000439844 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
AL391415.1-201ENST00000439844 SHROOM4Q9ULL8 1493 aa26.99■■□□□ 1.91
AL391415.1-201ENST00000439844 PHF23Q9BUL5 403 aaPredicted RBP26.98■■□□□ 1.91
AL391415.1-201ENST00000439844 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
AL391415.1-201ENST00000439844 SENP3Q9H4L4 574 aaPredicted RBP26.69■■□□□ 1.86
AL391415.1-201ENST00000439844 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
AL391415.1-201ENST00000439844 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
AL391415.1-201ENST00000439844 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
AL391415.1-201ENST00000439844 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
AL391415.1-201ENST00000439844 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
AL391415.1-201ENST00000439844 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
AL391415.1-201ENST00000439844 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
AL391415.1-201ENST00000439844 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
AL391415.1-201ENST00000439844 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
AL391415.1-201ENST00000439844 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
AL391415.1-201ENST00000439844 RSF1Q96T23 1441 aaPredicted RBP25.95■■□□□ 1.74
AL391415.1-201ENST00000439844 WIZO95785 1651 aa25.93■■□□□ 1.74
AL391415.1-201ENST00000439844 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
AL391415.1-201ENST00000439844 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
AL391415.1-201ENST00000439844 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
AL391415.1-201ENST00000439844 NESP48681 1621 aa25.44■■□□□ 1.66
AL391415.1-201ENST00000439844 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
AL391415.1-201ENST00000439844 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
AL391415.1-201ENST00000439844 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
AL391415.1-201ENST00000439844 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
AL391415.1-201ENST00000439844 CFTRP13569 1480 aa25.18■■□□□ 1.62
AL391415.1-201ENST00000439844 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
AL391415.1-201ENST00000439844 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
AL391415.1-201ENST00000439844 PDS5BQ9NTI5 1447 aa25.04■■□□□ 1.6
AL391415.1-201ENST00000439844 THOC2Q8NI27 1593 aaKnown RBP25■■□□□ 1.59
AL391415.1-201ENST00000439844 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
AL391415.1-201ENST00000439844 FANCD2Q9BXW9 1451 aa24.98■■□□□ 1.59
AL391415.1-201ENST00000439844 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
AL391415.1-201ENST00000439844 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.58
AL391415.1-201ENST00000439844 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
AL391415.1-201ENST00000439844 FOXD1Q16676 465 aa24.8■■□□□ 1.56
AL391415.1-201ENST00000439844 WDR62O43379 1518 aa24.8■■□□□ 1.56
AL391415.1-201ENST00000439844 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
AL391415.1-201ENST00000439844 CUX2O14529 1486 aa24.78■■□□□ 1.56
AL391415.1-201ENST00000439844 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
AL391415.1-201ENST00000439844 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
AL391415.1-201ENST00000439844 CUX1P39880 1505 aa24.57■■□□□ 1.52
AL391415.1-201ENST00000439844 ABCC8Q09428 1581 aa24.51■■□□□ 1.51
AL391415.1-201ENST00000439844 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
AL391415.1-201ENST00000439844 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
AL391415.1-201ENST00000439844 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
AL391415.1-201ENST00000439844 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
AL391415.1-201ENST00000439844 WRNQ14191 1432 aaPredicted RBP eCLIP24.39■■□□□ 1.5
AL391415.1-201ENST00000439844 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
AL391415.1-201ENST00000439844 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
AL391415.1-201ENST00000439844 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
AL391415.1-201ENST00000439844 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
AL391415.1-201ENST00000439844 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
AL391415.1-201ENST00000439844 SOGA1O94964 1423 aa24.27■■□□□ 1.48
AL391415.1-201ENST00000439844 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
AL391415.1-201ENST00000439844 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
AL391415.1-201ENST00000439844 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.47
AL391415.1-201ENST00000439844 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
AL391415.1-201ENST00000439844 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
AL391415.1-201ENST00000439844 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
AL391415.1-201ENST00000439844 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
AL391415.1-201ENST00000439844 PBRM1Q86U86 1689 aa24■■□□□ 1.43
AL391415.1-201ENST00000439844 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
AL391415.1-201ENST00000439844 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
AL391415.1-201ENST00000439844 CHD1O14646 1710 aa23.9■■□□□ 1.42
AL391415.1-201ENST00000439844 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
AL391415.1-201ENST00000439844 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
AL391415.1-201ENST00000439844 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
AL391415.1-201ENST00000439844 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
AL391415.1-201ENST00000439844 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
AL391415.1-201ENST00000439844 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
AL391415.1-201ENST00000439844 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
AL391415.1-201ENST00000439844 KIF27Q86VH2 1401 aa23.81■■□□□ 1.4
AL391415.1-201ENST00000439844 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
AL391415.1-201ENST00000439844 ADRA2BP18089 450 aa23.8■■□□□ 1.4
AL391415.1-201ENST00000439844 IGF1RP08069 1367 aa23.78■■□□□ 1.4
AL391415.1-201ENST00000439844 FBLN2P98095 1184 aa23.74■■□□□ 1.39
AL391415.1-201ENST00000439844 OSCARQ8IYS5 282 aa23.73■■□□□ 1.39
AL391415.1-201ENST00000439844 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
AL391415.1-201ENST00000439844 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
AL391415.1-201ENST00000439844 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
AL391415.1-201ENST00000439844 CLASP1Q7Z460 1538 aa23.66■■□□□ 1.38
AL391415.1-201ENST00000439844 CUL7Q14999 1698 aa23.66■■□□□ 1.38
AL391415.1-201ENST00000439844 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
AL391415.1-201ENST00000439844 NUP160Q12769 1436 aa23.61■■□□□ 1.37
AL391415.1-201ENST00000439844 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms