RNA–Protein interactions for RNA: ENST00000369442.3

GDAP2-201, Transcript of ganglioside induced differentiation associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene GDAP2, Length 2,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDAP2-201ENST00000369442 NISCHQ9Y2I1 1504 aa30.3■■■□□ 2.44
GDAP2-201ENST00000369442 CCDC180Q9P1Z9 1646 aa26.02■■□□□ 1.76
GDAP2-201ENST00000369442 ZCCHC6Q5VYS8 1495 aaKnown RBP25.51■■□□□ 1.67
GDAP2-201ENST00000369442 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
GDAP2-201ENST00000369442 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
GDAP2-201ENST00000369442 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
GDAP2-201ENST00000369442 ABCC9O60706 1549 aa24.76■■□□□ 1.55
GDAP2-201ENST00000369442 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
GDAP2-201ENST00000369442 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
GDAP2-201ENST00000369442 MYO15BQ96JP2 1530 aa24.29■■□□□ 1.48
GDAP2-201ENST00000369442 NACADO15069 1562 aa24.21■■□□□ 1.47
GDAP2-201ENST00000369442 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
GDAP2-201ENST00000369442 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
GDAP2-201ENST00000369442 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
GDAP2-201ENST00000369442 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
GDAP2-201ENST00000369442 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
GDAP2-201ENST00000369442 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
GDAP2-201ENST00000369442 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
GDAP2-201ENST00000369442 WIZO95785 1651 aa23.42■■□□□ 1.34
GDAP2-201ENST00000369442 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
GDAP2-201ENST00000369442 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
GDAP2-201ENST00000369442 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
GDAP2-201ENST00000369442 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
GDAP2-201ENST00000369442 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
GDAP2-201ENST00000369442 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
GDAP2-201ENST00000369442 CCDC88BA6NC98 1476 aa22.91■■□□□ 1.26
GDAP2-201ENST00000369442 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
GDAP2-201ENST00000369442 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
GDAP2-201ENST00000369442 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
GDAP2-201ENST00000369442 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
GDAP2-201ENST00000369442 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
GDAP2-201ENST00000369442 EHMT2Q96KQ7 1210 aa22.73■■□□□ 1.23
GDAP2-201ENST00000369442 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
GDAP2-201ENST00000369442 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
GDAP2-201ENST00000369442 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
GDAP2-201ENST00000369442 HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
GDAP2-201ENST00000369442 SOGA1O94964 1423 aa22.33■■□□□ 1.16
GDAP2-201ENST00000369442 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
GDAP2-201ENST00000369442 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
GDAP2-201ENST00000369442 SYNJ1O43426 1573 aa22.27■■□□□ 1.16
GDAP2-201ENST00000369442 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
GDAP2-201ENST00000369442 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
GDAP2-201ENST00000369442 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.12
GDAP2-201ENST00000369442 CFTRP13569 1480 aa22.07■■□□□ 1.12
GDAP2-201ENST00000369442 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
GDAP2-201ENST00000369442 TOP2BQ02880 1626 aa22■■□□□ 1.11
GDAP2-201ENST00000369442 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
GDAP2-201ENST00000369442 CUX1P39880 1505 aa21.98■■□□□ 1.11
GDAP2-201ENST00000369442 EEA1Q15075 1411 aa21.97■■□□□ 1.11
GDAP2-201ENST00000369442 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
GDAP2-201ENST00000369442 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
GDAP2-201ENST00000369442 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
GDAP2-201ENST00000369442 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.1
GDAP2-201ENST00000369442 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
GDAP2-201ENST00000369442 NESP48681 1621 aa21.88■■□□□ 1.09
GDAP2-201ENST00000369442 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
GDAP2-201ENST00000369442 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
GDAP2-201ENST00000369442 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
GDAP2-201ENST00000369442 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
GDAP2-201ENST00000369442 TTBK1Q5TCY1 1321 aaPredicted RBP21.81■■□□□ 1.08
GDAP2-201ENST00000369442 RAPGEF2Q9Y4G8 1499 aa21.8■■□□□ 1.08
GDAP2-201ENST00000369442 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
GDAP2-201ENST00000369442 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.07
GDAP2-201ENST00000369442 KIF21BO75037 1637 aa21.76■■□□□ 1.07
GDAP2-201ENST00000369442 HRCP23327 699 aa21.73■■□□□ 1.07
GDAP2-201ENST00000369442 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
GDAP2-201ENST00000369442 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
GDAP2-201ENST00000369442 CUX2O14529 1486 aa21.64■■□□□ 1.06
GDAP2-201ENST00000369442 CLIP1P30622 1438 aa21.61■■□□□ 1.05
GDAP2-201ENST00000369442 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
GDAP2-201ENST00000369442 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
GDAP2-201ENST00000369442 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
GDAP2-201ENST00000369442 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
GDAP2-201ENST00000369442 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
GDAP2-201ENST00000369442 IGF1RP08069 1367 aa21.51■■□□□ 1.03
GDAP2-201ENST00000369442 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
GDAP2-201ENST00000369442 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
GDAP2-201ENST00000369442 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
GDAP2-201ENST00000369442 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
GDAP2-201ENST00000369442 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
GDAP2-201ENST00000369442 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
GDAP2-201ENST00000369442 VPS8Q8N3P4 1428 aa21.41■■□□□ 1.02
GDAP2-201ENST00000369442 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
GDAP2-201ENST00000369442 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
GDAP2-201ENST00000369442 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
GDAP2-201ENST00000369442 ARHGAP35Q9NRY4 1499 aa21.28■■□□□ 1
GDAP2-201ENST00000369442 APLP2Q06481 763 aa21.27■■□□□ 1
GDAP2-201ENST00000369442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.26■□□□□ 0.99
GDAP2-201ENST00000369442 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
GDAP2-201ENST00000369442 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
GDAP2-201ENST00000369442 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
GDAP2-201ENST00000369442 GAPVD1Q14C86 1478 aa21.19■□□□□ 0.98
GDAP2-201ENST00000369442 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
GDAP2-201ENST00000369442 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
GDAP2-201ENST00000369442 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
GDAP2-201ENST00000369442 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
GDAP2-201ENST00000369442 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.97
GDAP2-201ENST00000369442 CUL7Q14999 1698 aa21.13■□□□□ 0.97
GDAP2-201ENST00000369442 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
GDAP2-201ENST00000369442 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms