RNA–Protein interactions for RNA: ENST00000263519.4

ATP2B3-201, Transcript of ATPase plasma membrane Ca2+ transporting 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B3, Length 6,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3-201ENST00000263519 DCAF8L2P0C7V8 631 aa23.96■■□□□ 1.43
ATP2B3-201ENST00000263519 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
ATP2B3-201ENST00000263519 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
ATP2B3-201ENST00000263519 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
ATP2B3-201ENST00000263519 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
ATP2B3-201ENST00000263519 TTBK1Q5TCY1 1321 aaPredicted RBP21.93■■□□□ 1.1
ATP2B3-201ENST00000263519 APLP2Q06481 763 aa21.92■■□□□ 1.1
ATP2B3-201ENST00000263519 ERICH6Q7L0X2 663 aa21.88■■□□□ 1.09
ATP2B3-201ENST00000263519 FAM9AQ8IZU1 332 aaPredicted RBP21.69■■□□□ 1.06
ATP2B3-201ENST00000263519 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.05
ATP2B3-201ENST00000263519 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
ATP2B3-201ENST00000263519 CCER1Q8TC90 406 aaPredicted RBP21.52■■□□□ 1.04
ATP2B3-201ENST00000263519 CENPBP07199 599 aaPredicted RBP21.51■■□□□ 1.03
ATP2B3-201ENST00000263519 RANGAP1P46060 587 aaPredicted RBP21.51■■□□□ 1.03
ATP2B3-201ENST00000263519 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
ATP2B3-201ENST00000263519 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
ATP2B3-201ENST00000263519 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
ATP2B3-201ENST00000263519 NEFLP07196 543 aa21.15■□□□□ 0.98
ATP2B3-201ENST00000263519 MYT1Q01538 1121 aa21.08■□□□□ 0.96
ATP2B3-201ENST00000263519 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
ATP2B3-201ENST00000263519 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
ATP2B3-201ENST00000263519 PPARGC1BQ86YN6 1023 aaKnown RBP20.89■□□□□ 0.93
ATP2B3-201ENST00000263519 DAXXQ9UER7 740 aaPredicted RBP20.75■□□□□ 0.91
ATP2B3-201ENST00000263519 POLR3GLQ9BT43 218 aa20.67■□□□□ 0.9
ATP2B3-201ENST00000263519 CNGB1Q14028 1251 aaPredicted RBP20.56■□□□□ 0.88
ATP2B3-201ENST00000263519 ITGAEP38570 1179 aa20.53■□□□□ 0.88
ATP2B3-201ENST00000263519 MYT1LQ9UL68 1186 aa20.48■□□□□ 0.87
ATP2B3-201ENST00000263519 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
ATP2B3-201ENST00000263519 HRCP23327 699 aa20.39■□□□□ 0.85
ATP2B3-201ENST00000263519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
ATP2B3-201ENST00000263519 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
ATP2B3-201ENST00000263519 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
ATP2B3-201ENST00000263519 ZNF316A6NFI3 1004 aaPredicted RBP20.31■□□□□ 0.84
ATP2B3-201ENST00000263519 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
ATP2B3-201ENST00000263519 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
ATP2B3-201ENST00000263519 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
ATP2B3-201ENST00000263519 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
ATP2B3-201ENST00000263519 BCANQ96GW7 911 aa20.03■□□□□ 0.8
ATP2B3-201ENST00000263519 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.79
ATP2B3-201ENST00000263519 FAM50AQ14320 339 aaKnown RBP19.87■□□□□ 0.77
ATP2B3-201ENST00000263519 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
ATP2B3-201ENST00000263519 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
ATP2B3-201ENST00000263519 BCL11AQ9H165 835 aa19.81■□□□□ 0.76
ATP2B3-201ENST00000263519 GTF3C3Q9Y5Q9 886 aa19.79■□□□□ 0.76
ATP2B3-201ENST00000263519 CDK11AQ9UQ88 783 aaPredicted RBP19.74■□□□□ 0.75
ATP2B3-201ENST00000263519 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
ATP2B3-201ENST00000263519 ZBTB47Q9UFB7 747 aaPredicted RBP19.69■□□□□ 0.74
ATP2B3-201ENST00000263519 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
ATP2B3-201ENST00000263519 ANP32CO43423 234 aa19.65■□□□□ 0.74
ATP2B3-201ENST00000263519 CANXP27824 592 aaKnown RBP19.63■□□□□ 0.73
ATP2B3-201ENST00000263519 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
ATP2B3-201ENST00000263519 ANP32AP39687 249 aaKnown RBP19.45■□□□□ 0.7
ATP2B3-201ENST00000263519 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
ATP2B3-201ENST00000263519 NEFMP07197 916 aa19.32■□□□□ 0.68
ATP2B3-201ENST00000263519 ACIN1Q9UKV3 1341 aaKnown RBP19.3■□□□□ 0.68
ATP2B3-201ENST00000263519 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
ATP2B3-201ENST00000263519 FBLN2P98095 1184 aa19.25■□□□□ 0.67
ATP2B3-201ENST00000263519 ANP32BQ92688 251 aaKnown RBP19.24■□□□□ 0.67
ATP2B3-201ENST00000263519 FKBP8Q14318 412 aa19.23■□□□□ 0.67
ATP2B3-201ENST00000263519 HSP90AA1P07900 732 aaKnown RBP19.21■□□□□ 0.67
ATP2B3-201ENST00000263519 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
ATP2B3-201ENST00000263519 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
ATP2B3-201ENST00000263519 ARXQ96QS3 562 aa19.15■□□□□ 0.66
ATP2B3-201ENST00000263519 NBR1Q14596 966 aa19.15■□□□□ 0.66
ATP2B3-201ENST00000263519 ZNF777Q9ULD5 760 aaPredicted RBP19.12■□□□□ 0.65
ATP2B3-201ENST00000263519 SALL2Q9Y467 1007 aaPredicted RBP19.08■□□□□ 0.64
ATP2B3-201ENST00000263519 FAM9BQ8IZU0 186 aa19.06■□□□□ 0.64
ATP2B3-201ENST00000263519 UPF2Q9HAU5 1272 aaKnown RBP19.05■□□□□ 0.64
ATP2B3-201ENST00000263519 HNRNPUQ00839 825 aaKnown RBP eCLIP19.02■□□□□ 0.64
ATP2B3-201ENST00000263519 GLIPR1L2Q4G1C9 344 aa19.02■□□□□ 0.64
ATP2B3-201ENST00000263519 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
ATP2B3-201ENST00000263519 CHGAP10645 457 aaKnown RBP18.97■□□□□ 0.63
ATP2B3-201ENST00000263519 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
ATP2B3-201ENST00000263519 TONSLQ96HA7 1378 aa18.91■□□□□ 0.62
ATP2B3-201ENST00000263519 ABCC9O60706 1549 aa18.89■□□□□ 0.62
ATP2B3-201ENST00000263519 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.61
ATP2B3-201ENST00000263519 STAG3Q9UJ98 1225 aa18.89■□□□□ 0.61
ATP2B3-201ENST00000263519 IRX6P78412 446 aaPredicted RBP18.88■□□□□ 0.61
ATP2B3-201ENST00000263519 ESF1Q9H501 851 aaKnown RBP18.83■□□□□ 0.6
ATP2B3-201ENST00000263519 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.79■□□□□ 0.6
ATP2B3-201ENST00000263519 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
ATP2B3-201ENST00000263519 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
ATP2B3-201ENST00000263519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
ATP2B3-201ENST00000263519 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
ATP2B3-201ENST00000263519 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
ATP2B3-201ENST00000263519 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
ATP2B3-201ENST00000263519 CDK11BP21127 795 aaKnown RBP18.7■□□□□ 0.58
ATP2B3-201ENST00000263519 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
ATP2B3-201ENST00000263519 MRS2Q9HD23 443 aa18.69■□□□□ 0.58
ATP2B3-201ENST00000263519 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
ATP2B3-201ENST00000263519 HIRIP3Q9BW71 556 aaPredicted RBP18.68■□□□□ 0.58
ATP2B3-201ENST00000263519 ZBTB7CA1YPR0 619 aa18.67■□□□□ 0.58
ATP2B3-201ENST00000263519 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
ATP2B3-201ENST00000263519 A0A0G2JS52 829 aa18.66■□□□□ 0.58
ATP2B3-201ENST00000263519 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
ATP2B3-201ENST00000263519 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
ATP2B3-201ENST00000263519 TRIM44Q96DX7 344 aaPredicted RBP18.63■□□□□ 0.57
ATP2B3-201ENST00000263519 NCLP19338 710 aaKnown RBP18.61■□□□□ 0.57
ATP2B3-201ENST00000263519 MIER1Q8N108 512 aa18.6■□□□□ 0.57
ATP2B3-201ENST00000263519 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms