RNA–Protein interactions for RNA: ENST00000541043.5

ACO1-203, Transcript of aconitase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ACO1, Length 3,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACO1-203ENST00000541043 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
ACO1-203ENST00000541043 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
ACO1-203ENST00000541043 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
ACO1-203ENST00000541043 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
ACO1-203ENST00000541043 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
ACO1-203ENST00000541043 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
ACO1-203ENST00000541043 ABCC9O60706 1549 aa23.65■■□□□ 1.38
ACO1-203ENST00000541043 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
ACO1-203ENST00000541043 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
ACO1-203ENST00000541043 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
ACO1-203ENST00000541043 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
ACO1-203ENST00000541043 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
ACO1-203ENST00000541043 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
ACO1-203ENST00000541043 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
ACO1-203ENST00000541043 TRIM41Q8WV44 630 aa22.83■■□□□ 1.25
ACO1-203ENST00000541043 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
ACO1-203ENST00000541043 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
ACO1-203ENST00000541043 CECR2Q9BXF3 1484 aa22.63■■□□□ 1.21
ACO1-203ENST00000541043 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
ACO1-203ENST00000541043 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
ACO1-203ENST00000541043 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
ACO1-203ENST00000541043 NACADO15069 1562 aa22.34■■□□□ 1.17
ACO1-203ENST00000541043 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
ACO1-203ENST00000541043 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
ACO1-203ENST00000541043 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
ACO1-203ENST00000541043 WIZO95785 1651 aa22.11■■□□□ 1.13
ACO1-203ENST00000541043 UBTFP17480 764 aaKnown RBP22.04■■□□□ 1.12
ACO1-203ENST00000541043 HRCP23327 699 aa21.91■■□□□ 1.1
ACO1-203ENST00000541043 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
ACO1-203ENST00000541043 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
ACO1-203ENST00000541043 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
ACO1-203ENST00000541043 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.07
ACO1-203ENST00000541043 SOGA1O94964 1423 aa21.63■■□□□ 1.05
ACO1-203ENST00000541043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
ACO1-203ENST00000541043 CSRNP3Q8WYN3 585 aa21.62■■□□□ 1.05
ACO1-203ENST00000541043 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
ACO1-203ENST00000541043 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
ACO1-203ENST00000541043 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
ACO1-203ENST00000541043 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
ACO1-203ENST00000541043 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
ACO1-203ENST00000541043 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
ACO1-203ENST00000541043 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
ACO1-203ENST00000541043 APLP2Q06481 763 aa21.44■■□□□ 1.02
ACO1-203ENST00000541043 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
ACO1-203ENST00000541043 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
ACO1-203ENST00000541043 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
ACO1-203ENST00000541043 ATAD2BQ9ULI0 1458 aa21.4■■□□□ 1.02
ACO1-203ENST00000541043 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
ACO1-203ENST00000541043 ITGAEP38570 1179 aa21.29■■□□□ 1
ACO1-203ENST00000541043 P3H3Q8IVL6 736 aa21.25■□□□□ 0.99
ACO1-203ENST00000541043 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
ACO1-203ENST00000541043 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
ACO1-203ENST00000541043 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
ACO1-203ENST00000541043 EIF4G1Q04637 1599 aaKnown RBP21.05■□□□□ 0.96
ACO1-203ENST00000541043 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
ACO1-203ENST00000541043 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
ACO1-203ENST00000541043 CLIP1P30622 1438 aa21.01■□□□□ 0.95
ACO1-203ENST00000541043 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
ACO1-203ENST00000541043 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
ACO1-203ENST00000541043 ARID3CA6NKF2 412 aa20.97■□□□□ 0.95
ACO1-203ENST00000541043 EEA1Q15075 1411 aa20.87■□□□□ 0.93
ACO1-203ENST00000541043 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
ACO1-203ENST00000541043 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
ACO1-203ENST00000541043 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
ACO1-203ENST00000541043 CUX2O14529 1486 aa20.81■□□□□ 0.92
ACO1-203ENST00000541043 NESP48681 1621 aa20.8■□□□□ 0.92
ACO1-203ENST00000541043 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
ACO1-203ENST00000541043 FAM50AQ14320 339 aaKnown RBP20.79■□□□□ 0.92
ACO1-203ENST00000541043 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
ACO1-203ENST00000541043 KIF27Q86VH2 1401 aa20.77■□□□□ 0.92
ACO1-203ENST00000541043 YTHDC1Q96MU7 727 aaKnown RBP20.77■□□□□ 0.91
ACO1-203ENST00000541043 FBLN2P98095 1184 aa20.73■□□□□ 0.91
ACO1-203ENST00000541043 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
ACO1-203ENST00000541043 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
ACO1-203ENST00000541043 CUX1P39880 1505 aa20.7■□□□□ 0.9
ACO1-203ENST00000541043 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
ACO1-203ENST00000541043 CFTRP13569 1480 aa20.66■□□□□ 0.9
ACO1-203ENST00000541043 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
ACO1-203ENST00000541043 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.9
ACO1-203ENST00000541043 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
ACO1-203ENST00000541043 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
ACO1-203ENST00000541043 IGF1RP08069 1367 aa20.59■□□□□ 0.89
ACO1-203ENST00000541043 NEUROD1Q13562 356 aa20.58■□□□□ 0.88
ACO1-203ENST00000541043 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
ACO1-203ENST00000541043 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
ACO1-203ENST00000541043 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
ACO1-203ENST00000541043 KIF21BO75037 1637 aa20.49■□□□□ 0.87
ACO1-203ENST00000541043 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
ACO1-203ENST00000541043 PRXQ9BXM0 1461 aa20.44■□□□□ 0.86
ACO1-203ENST00000541043 FHOD3Q2V2M9 1422 aa20.42■□□□□ 0.86
ACO1-203ENST00000541043 CHIC2Q9UKJ5 165 aa20.42■□□□□ 0.86
ACO1-203ENST00000541043 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
ACO1-203ENST00000541043 HIRIP3Q9BW71 556 aaPredicted RBP20.4■□□□□ 0.86
ACO1-203ENST00000541043 ARHGAP35Q9NRY4 1499 aa20.33■□□□□ 0.84
ACO1-203ENST00000541043 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
ACO1-203ENST00000541043 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
ACO1-203ENST00000541043 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.84
ACO1-203ENST00000541043 TOPBP1Q92547 1522 aa20.28■□□□□ 0.84
ACO1-203ENST00000541043 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
ACO1-203ENST00000541043 MIER1Q8N108 512 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms