RNA–Protein interactions for RNA: ENST00000628418.1

CNOT7-213, Transcript of CCR4-NOT transcription complex subunit 7, humanhuman

TSL 5 BASIC

Gene CNOT7, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT7-213ENST00000628418 NISCHQ9Y2I1 1504 aa35.14■■■■□ 3.22
CNOT7-213ENST00000628418 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
CNOT7-213ENST00000628418 ABCC9O60706 1549 aa31.1■■■□□ 2.57
CNOT7-213ENST00000628418 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
CNOT7-213ENST00000628418 NACADO15069 1562 aa29.64■■■□□ 2.33
CNOT7-213ENST00000628418 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
CNOT7-213ENST00000628418 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
CNOT7-213ENST00000628418 ZCCHC6Q5VYS8 1495 aaKnown RBP29.21■■■□□ 2.27
CNOT7-213ENST00000628418 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
CNOT7-213ENST00000628418 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
CNOT7-213ENST00000628418 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
CNOT7-213ENST00000628418 BICRAQ9NZM4 1560 aa28.89■■■□□ 2.22
CNOT7-213ENST00000628418 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
CNOT7-213ENST00000628418 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
CNOT7-213ENST00000628418 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
CNOT7-213ENST00000628418 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
CNOT7-213ENST00000628418 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.09
CNOT7-213ENST00000628418 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
CNOT7-213ENST00000628418 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
CNOT7-213ENST00000628418 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
CNOT7-213ENST00000628418 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
CNOT7-213ENST00000628418 BAZ1AQ9NRL2 1556 aaPredicted RBP27.28■■□□□ 1.96
CNOT7-213ENST00000628418 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
CNOT7-213ENST00000628418 HMGXB3Q12766 1538 aa27.2■■□□□ 1.94
CNOT7-213ENST00000628418 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
CNOT7-213ENST00000628418 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
CNOT7-213ENST00000628418 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
CNOT7-213ENST00000628418 ERCC6Q03468 1493 aa26.84■■□□□ 1.89
CNOT7-213ENST00000628418 NESP48681 1621 aa26.81■■□□□ 1.88
CNOT7-213ENST00000628418 WIZO95785 1651 aa26.79■■□□□ 1.88
CNOT7-213ENST00000628418 CUX2O14529 1486 aa26.71■■□□□ 1.87
CNOT7-213ENST00000628418 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
CNOT7-213ENST00000628418 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
CNOT7-213ENST00000628418 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
CNOT7-213ENST00000628418 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
CNOT7-213ENST00000628418 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
CNOT7-213ENST00000628418 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
CNOT7-213ENST00000628418 TOP2AP11388 1531 aaKnown RBP26.48■■□□□ 1.83
CNOT7-213ENST00000628418 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
CNOT7-213ENST00000628418 CFTRP13569 1480 aa26.28■■□□□ 1.8
CNOT7-213ENST00000628418 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
CNOT7-213ENST00000628418 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
CNOT7-213ENST00000628418 WDR62O43379 1518 aa26.23■■□□□ 1.79
CNOT7-213ENST00000628418 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
CNOT7-213ENST00000628418 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
CNOT7-213ENST00000628418 PRDM2Q13029 1718 aa26.13■■□□□ 1.77
CNOT7-213ENST00000628418 URB2Q14146 1524 aaKnown RBP25.99■■□□□ 1.75
CNOT7-213ENST00000628418 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
CNOT7-213ENST00000628418 ABCC8Q09428 1581 aa25.72■■□□□ 1.71
CNOT7-213ENST00000628418 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
CNOT7-213ENST00000628418 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
CNOT7-213ENST00000628418 ZNF608Q9ULD9 1512 aaPredicted RBP25.61■■□□□ 1.69
CNOT7-213ENST00000628418 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
CNOT7-213ENST00000628418 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
CNOT7-213ENST00000628418 TARBP1Q13395 1621 aaKnown RBP25.53■■□□□ 1.68
CNOT7-213ENST00000628418 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
CNOT7-213ENST00000628418 OSCARQ8IYS5 282 aa25.46■■□□□ 1.67
CNOT7-213ENST00000628418 CUX1P39880 1505 aa25.43■■□□□ 1.66
CNOT7-213ENST00000628418 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
CNOT7-213ENST00000628418 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.66
CNOT7-213ENST00000628418 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
CNOT7-213ENST00000628418 SOGA1O94964 1423 aa25.37■■□□□ 1.65
CNOT7-213ENST00000628418 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
CNOT7-213ENST00000628418 CHD1O14646 1710 aa25.29■■□□□ 1.64
CNOT7-213ENST00000628418 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
CNOT7-213ENST00000628418 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
CNOT7-213ENST00000628418 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
CNOT7-213ENST00000628418 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
CNOT7-213ENST00000628418 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
CNOT7-213ENST00000628418 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
CNOT7-213ENST00000628418 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
CNOT7-213ENST00000628418 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
CNOT7-213ENST00000628418 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
CNOT7-213ENST00000628418 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
CNOT7-213ENST00000628418 FBLN2P98095 1184 aa25.13■■□□□ 1.61
CNOT7-213ENST00000628418 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
CNOT7-213ENST00000628418 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
CNOT7-213ENST00000628418 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
CNOT7-213ENST00000628418 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
CNOT7-213ENST00000628418 WRNQ14191 1432 aaPredicted RBP eCLIP25.11■■□□□ 1.61
CNOT7-213ENST00000628418 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
CNOT7-213ENST00000628418 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
CNOT7-213ENST00000628418 SYNJ2O15056 1496 aa25.04■■□□□ 1.6
CNOT7-213ENST00000628418 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
CNOT7-213ENST00000628418 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
CNOT7-213ENST00000628418 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
CNOT7-213ENST00000628418 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
CNOT7-213ENST00000628418 CYB5RLQ6IPT4 315 aa24.84■■□□□ 1.57
CNOT7-213ENST00000628418 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
CNOT7-213ENST00000628418 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
CNOT7-213ENST00000628418 FHAD1B1AJZ9 1412 aa24.79■■□□□ 1.56
CNOT7-213ENST00000628418 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
CNOT7-213ENST00000628418 NUP160Q12769 1436 aa24.74■■□□□ 1.55
CNOT7-213ENST00000628418 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
CNOT7-213ENST00000628418 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
CNOT7-213ENST00000628418 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
CNOT7-213ENST00000628418 CUL7Q14999 1698 aa24.56■■□□□ 1.52
CNOT7-213ENST00000628418 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
CNOT7-213ENST00000628418 IGF1RP08069 1367 aa24.53■■□□□ 1.52
CNOT7-213ENST00000628418 TRHP20396 242 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms