Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
HCFC2Q9Y5Z7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
HCFC2Q9Y5Z7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
HCFC2Q9Y5Z7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
HCFC2Q9Y5Z7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HCFC2Q9Y5Z7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HCFC2Q9Y5Z7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.8■■■□□ 2.36
HCFC2Q9Y5Z7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
HCFC2Q9Y5Z7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
HCFC2Q9Y5Z7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.76■■■□□ 2.35
HCFC2Q9Y5Z7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
HCFC2Q9Y5Z7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.75■■■□□ 2.35
HCFC2Q9Y5Z7 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.73■■■□□ 2.35
HCFC2Q9Y5Z7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
HCFC2Q9Y5Z7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
HCFC2Q9Y5Z7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.68■■■□□ 2.34
HCFC2Q9Y5Z7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
HCFC2Q9Y5Z7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
HCFC2Q9Y5Z7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.66■■■□□ 2.34
HCFC2Q9Y5Z7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.65■■■□□ 2.34
HCFC2Q9Y5Z7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.65■■■□□ 2.34
HCFC2Q9Y5Z7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
HCFC2Q9Y5Z7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
HCFC2Q9Y5Z7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.61■■■□□ 2.33
HCFC2Q9Y5Z7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.6■■■□□ 2.33
HCFC2Q9Y5Z7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
HCFC2Q9Y5Z7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.59■■■□□ 2.33
HCFC2Q9Y5Z7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
HCFC2Q9Y5Z7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.58■■■□□ 2.33
HCFC2Q9Y5Z7 MIR3665-201ENST00000578708 105 ntBASIC29.58■■■□□ 2.33
HCFC2Q9Y5Z7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
HCFC2Q9Y5Z7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
HCFC2Q9Y5Z7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.54■■■□□ 2.32
HCFC2Q9Y5Z7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.32
HCFC2Q9Y5Z7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.51■■■□□ 2.32
HCFC2Q9Y5Z7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
HCFC2Q9Y5Z7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HCFC2Q9Y5Z7 AC087741.3-201ENST00000624270 1347 ntBASIC29.47■■■□□ 2.31
HCFC2Q9Y5Z7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HCFC2Q9Y5Z7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HCFC2Q9Y5Z7 ABHD17AP4-201ENST00000411545 909 ntBASIC29.47■■■□□ 2.31
HCFC2Q9Y5Z7 DUX4L28-201ENST00000623687 678 ntBASIC29.46■■■□□ 2.31
HCFC2Q9Y5Z7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
HCFC2Q9Y5Z7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
HCFC2Q9Y5Z7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.45■■■□□ 2.3
HCFC2Q9Y5Z7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
HCFC2Q9Y5Z7 MIR7108-201ENST00000614319 87 ntBASIC29.44■■■□□ 2.3
HCFC2Q9Y5Z7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
HCFC2Q9Y5Z7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.43■■■□□ 2.3
HCFC2Q9Y5Z7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
HCFC2Q9Y5Z7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
HCFC2Q9Y5Z7 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.42■■■□□ 2.3
HCFC2Q9Y5Z7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
HCFC2Q9Y5Z7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
HCFC2Q9Y5Z7 MIR762-201ENST00000390236 83 ntBASIC29.4■■■□□ 2.3
HCFC2Q9Y5Z7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
HCFC2Q9Y5Z7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.39■■■□□ 2.3
HCFC2Q9Y5Z7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.39■■■□□ 2.3
HCFC2Q9Y5Z7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
HCFC2Q9Y5Z7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
HCFC2Q9Y5Z7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.37■■■□□ 2.29
HCFC2Q9Y5Z7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
HCFC2Q9Y5Z7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
HCFC2Q9Y5Z7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
HCFC2Q9Y5Z7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
HCFC2Q9Y5Z7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
HCFC2Q9Y5Z7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
HCFC2Q9Y5Z7 AC005559.1-201ENST00000589661 871 ntBASIC29.33■■■□□ 2.29
HCFC2Q9Y5Z7 AC044849.2-201ENST00000606596 710 ntBASIC29.33■■■□□ 2.29
HCFC2Q9Y5Z7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.32■■■□□ 2.28
HCFC2Q9Y5Z7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.31■■■□□ 2.28
HCFC2Q9Y5Z7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
HCFC2Q9Y5Z7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.3■■■□□ 2.28
HCFC2Q9Y5Z7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
HCFC2Q9Y5Z7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
HCFC2Q9Y5Z7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.26■■■□□ 2.28
HCFC2Q9Y5Z7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.26■■■□□ 2.27
HCFC2Q9Y5Z7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.25■■■□□ 2.27
HCFC2Q9Y5Z7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
HCFC2Q9Y5Z7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.24■■■□□ 2.27
HCFC2Q9Y5Z7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
HCFC2Q9Y5Z7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
HCFC2Q9Y5Z7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
HCFC2Q9Y5Z7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.2■■■□□ 2.26
HCFC2Q9Y5Z7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.19■■■□□ 2.26
HCFC2Q9Y5Z7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
HCFC2Q9Y5Z7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HCFC2Q9Y5Z7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HCFC2Q9Y5Z7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.18■■■□□ 2.26
HCFC2Q9Y5Z7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.17■■■□□ 2.26
HCFC2Q9Y5Z7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.16■■■□□ 2.26
HCFC2Q9Y5Z7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
HCFC2Q9Y5Z7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.15■■■□□ 2.26
HCFC2Q9Y5Z7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.14■■■□□ 2.26
HCFC2Q9Y5Z7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.25
HCFC2Q9Y5Z7 HLA-V-202ENST00000446817 847 ntBASIC29.12■■■□□ 2.25
HCFC2Q9Y5Z7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.09■■■□□ 2.25
HCFC2Q9Y5Z7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
HCFC2Q9Y5Z7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.09■■■□□ 2.25
HCFC2Q9Y5Z7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms