Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AC136428.2-201ENST00000563187 214 ntBASIC24.79■■□□□ 1.56
CNEP1R1Q8N9A8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
CNEP1R1Q8N9A8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.74■■□□□ 1.55
CNEP1R1Q8N9A8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CNEP1R1Q8N9A8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CNEP1R1Q8N9A8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.71■■□□□ 1.55
CNEP1R1Q8N9A8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.71■■□□□ 1.55
CNEP1R1Q8N9A8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CNEP1R1Q8N9A8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CNEP1R1Q8N9A8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CNEP1R1Q8N9A8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.68■■□□□ 1.54
CNEP1R1Q8N9A8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.68■■□□□ 1.54
CNEP1R1Q8N9A8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CNEP1R1Q8N9A8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CNEP1R1Q8N9A8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
CNEP1R1Q8N9A8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CNEP1R1Q8N9A8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.63■■□□□ 1.53
CNEP1R1Q8N9A8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CNEP1R1Q8N9A8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CNEP1R1Q8N9A8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.61■■□□□ 1.53
CNEP1R1Q8N9A8 AL133380.1-201ENST00000506013 324 ntBASIC24.61■■□□□ 1.53
CNEP1R1Q8N9A8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.61■■□□□ 1.53
CNEP1R1Q8N9A8 SUZ12P1-203ENST00000578195 985 ntBASIC24.59■■□□□ 1.53
CNEP1R1Q8N9A8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.59■■□□□ 1.53
CNEP1R1Q8N9A8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CNEP1R1Q8N9A8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CNEP1R1Q8N9A8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CNEP1R1Q8N9A8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.57■■□□□ 1.52
CNEP1R1Q8N9A8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CNEP1R1Q8N9A8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.56■■□□□ 1.52
CNEP1R1Q8N9A8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CNEP1R1Q8N9A8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CNEP1R1Q8N9A8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.53■■□□□ 1.52
CNEP1R1Q8N9A8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
CNEP1R1Q8N9A8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CNEP1R1Q8N9A8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CNEP1R1Q8N9A8 CAHM-201ENST00000604200 896 ntBASIC24.51■■□□□ 1.51
CNEP1R1Q8N9A8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CNEP1R1Q8N9A8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CNEP1R1Q8N9A8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CNEP1R1Q8N9A8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CNEP1R1Q8N9A8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CNEP1R1Q8N9A8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CNEP1R1Q8N9A8 AL391121.1-201ENST00000607967 1349 ntBASIC24.48■■□□□ 1.51
CNEP1R1Q8N9A8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CNEP1R1Q8N9A8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CNEP1R1Q8N9A8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNEP1R1Q8N9A8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CNEP1R1Q8N9A8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CNEP1R1Q8N9A8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.44■■□□□ 1.5
CNEP1R1Q8N9A8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CNEP1R1Q8N9A8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.43■■□□□ 1.5
CNEP1R1Q8N9A8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNEP1R1Q8N9A8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CNEP1R1Q8N9A8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CNEP1R1Q8N9A8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNEP1R1Q8N9A8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.39■■□□□ 1.49
CNEP1R1Q8N9A8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.39■■□□□ 1.49
CNEP1R1Q8N9A8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CNEP1R1Q8N9A8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CNEP1R1Q8N9A8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CNEP1R1Q8N9A8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CNEP1R1Q8N9A8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNEP1R1Q8N9A8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.35■■□□□ 1.49
CNEP1R1Q8N9A8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNEP1R1Q8N9A8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNEP1R1Q8N9A8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CNEP1R1Q8N9A8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.33■■□□□ 1.49
CNEP1R1Q8N9A8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CNEP1R1Q8N9A8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.31■■□□□ 1.48
CNEP1R1Q8N9A8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CNEP1R1Q8N9A8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNEP1R1Q8N9A8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CNEP1R1Q8N9A8 RPS2P35-201ENST00000443417 897 ntBASIC24.3■■□□□ 1.48
CNEP1R1Q8N9A8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CNEP1R1Q8N9A8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CNEP1R1Q8N9A8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.28■■□□□ 1.48
CNEP1R1Q8N9A8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CNEP1R1Q8N9A8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CNEP1R1Q8N9A8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CNEP1R1Q8N9A8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CNEP1R1Q8N9A8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CNEP1R1Q8N9A8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.26■■□□□ 1.47
CNEP1R1Q8N9A8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.25■■□□□ 1.47
CNEP1R1Q8N9A8 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.25■■□□□ 1.47
CNEP1R1Q8N9A8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CNEP1R1Q8N9A8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CNEP1R1Q8N9A8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CNEP1R1Q8N9A8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.22■■□□□ 1.47
CNEP1R1Q8N9A8 AP006261.1-201ENST00000584783 668 ntBASIC24.22■■□□□ 1.47
CNEP1R1Q8N9A8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CNEP1R1Q8N9A8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CNEP1R1Q8N9A8 WASH5P-204ENST00000632292 975 ntBASIC24.21■■□□□ 1.47
CNEP1R1Q8N9A8 AL162393.1-201ENST00000437852 946 ntBASIC24.2■■□□□ 1.46
CNEP1R1Q8N9A8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CNEP1R1Q8N9A8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CNEP1R1Q8N9A8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CNEP1R1Q8N9A8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
CNEP1R1Q8N9A8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CNEP1R1Q8N9A8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms