Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CPNE9Q8IYJ1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
CPNE9Q8IYJ1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.49■■□□□ 1.99
CPNE9Q8IYJ1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CPNE9Q8IYJ1 AL031258.1-201ENST00000623562 325 ntBASIC27.48■■□□□ 1.99
CPNE9Q8IYJ1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.47■■□□□ 1.99
CPNE9Q8IYJ1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.46■■□□□ 1.99
CPNE9Q8IYJ1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
CPNE9Q8IYJ1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPNE9Q8IYJ1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPNE9Q8IYJ1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CPNE9Q8IYJ1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPNE9Q8IYJ1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPNE9Q8IYJ1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPNE9Q8IYJ1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPNE9Q8IYJ1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.38■■□□□ 1.97
CPNE9Q8IYJ1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.35■■□□□ 1.97
CPNE9Q8IYJ1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.34■■□□□ 1.97
CPNE9Q8IYJ1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CPNE9Q8IYJ1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.32■■□□□ 1.96
CPNE9Q8IYJ1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CPNE9Q8IYJ1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CPNE9Q8IYJ1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CPNE9Q8IYJ1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CPNE9Q8IYJ1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CPNE9Q8IYJ1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.29■■□□□ 1.96
CPNE9Q8IYJ1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
CPNE9Q8IYJ1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CPNE9Q8IYJ1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CPNE9Q8IYJ1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.28■■□□□ 1.96
CPNE9Q8IYJ1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPNE9Q8IYJ1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CPNE9Q8IYJ1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.27■■□□□ 1.96
CPNE9Q8IYJ1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPNE9Q8IYJ1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPNE9Q8IYJ1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPNE9Q8IYJ1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.25■■□□□ 1.95
CPNE9Q8IYJ1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CPNE9Q8IYJ1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.23■■□□□ 1.95
CPNE9Q8IYJ1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CPNE9Q8IYJ1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CPNE9Q8IYJ1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.21■■□□□ 1.95
CPNE9Q8IYJ1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.21■■□□□ 1.95
CPNE9Q8IYJ1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
CPNE9Q8IYJ1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.21■■□□□ 1.95
CPNE9Q8IYJ1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.19■■□□□ 1.94
CPNE9Q8IYJ1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CPNE9Q8IYJ1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CPNE9Q8IYJ1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CPNE9Q8IYJ1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.17■■□□□ 1.94
CPNE9Q8IYJ1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.17■■□□□ 1.94
CPNE9Q8IYJ1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CPNE9Q8IYJ1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CPNE9Q8IYJ1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.15■■□□□ 1.94
CPNE9Q8IYJ1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CPNE9Q8IYJ1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 AC120057.4-201ENST00000624722 1615 ntBASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CPNE9Q8IYJ1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.11■■□□□ 1.93
CPNE9Q8IYJ1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.11■■□□□ 1.93
CPNE9Q8IYJ1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CPNE9Q8IYJ1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPNE9Q8IYJ1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CPNE9Q8IYJ1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CPNE9Q8IYJ1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CPNE9Q8IYJ1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CPNE9Q8IYJ1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
CPNE9Q8IYJ1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CPNE9Q8IYJ1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.04■■□□□ 1.92
CPNE9Q8IYJ1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CPNE9Q8IYJ1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE9Q8IYJ1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE9Q8IYJ1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.01■■□□□ 1.92
CPNE9Q8IYJ1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CPNE9Q8IYJ1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
CPNE9Q8IYJ1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CPNE9Q8IYJ1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CPNE9Q8IYJ1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CPNE9Q8IYJ1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CPNE9Q8IYJ1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CPNE9Q8IYJ1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CPNE9Q8IYJ1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.96■■□□□ 1.91
CPNE9Q8IYJ1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CPNE9Q8IYJ1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.95■■□□□ 1.9
CPNE9Q8IYJ1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CPNE9Q8IYJ1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CPNE9Q8IYJ1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPNE9Q8IYJ1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CPNE9Q8IYJ1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.92■■□□□ 1.9
CPNE9Q8IYJ1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.92■■□□□ 1.9
CPNE9Q8IYJ1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CPNE9Q8IYJ1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CPNE9Q8IYJ1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CPNE9Q8IYJ1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CPNE9Q8IYJ1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms