Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.37■■■■□ 3.41
COL23A1Q86Y22 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC36.34■■■■□ 3.41
COL23A1Q86Y22 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
COL23A1Q86Y22 AL133380.1-201ENST00000506013 324 ntBASIC36.31■■■■□ 3.4
COL23A1Q86Y22 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
COL23A1Q86Y22 ILK-212ENST00000532063 1617 ntTSL 2 BASIC36.3■■■■□ 3.4
COL23A1Q86Y22 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.29■■■■□ 3.4
COL23A1Q86Y22 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC36.29■■■■□ 3.4
COL23A1Q86Y22 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.29■■■■□ 3.4
COL23A1Q86Y22 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
COL23A1Q86Y22 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.27■■■■□ 3.4
COL23A1Q86Y22 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
COL23A1Q86Y22 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.26■■■■□ 3.4
COL23A1Q86Y22 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.25■■■■□ 3.39
COL23A1Q86Y22 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
COL23A1Q86Y22 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC36.21■■■■□ 3.39
COL23A1Q86Y22 MIR3665-201ENST00000578708 105 ntBASIC36.21■■■■□ 3.39
COL23A1Q86Y22 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC36.19■■■■□ 3.38
COL23A1Q86Y22 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.17■■■■□ 3.38
COL23A1Q86Y22 AC087741.3-201ENST00000624270 1347 ntBASIC36.15■■■■□ 3.38
COL23A1Q86Y22 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.15■■■■□ 3.38
COL23A1Q86Y22 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.14■■■■□ 3.38
COL23A1Q86Y22 MBP-237ENST00000579129 1052 ntTSL 5 BASIC36.14■■■■□ 3.38
COL23A1Q86Y22 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
COL23A1Q86Y22 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.1■■■■□ 3.37
COL23A1Q86Y22 HLA-V-202ENST00000446817 847 ntBASIC36.08■■■■□ 3.37
COL23A1Q86Y22 DUX4L28-201ENST00000623687 678 ntBASIC36.08■■■■□ 3.37
COL23A1Q86Y22 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC36.07■■■■□ 3.37
COL23A1Q86Y22 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
COL23A1Q86Y22 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
COL23A1Q86Y22 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
COL23A1Q86Y22 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.02■■■■□ 3.36
COL23A1Q86Y22 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.01■■■■□ 3.36
COL23A1Q86Y22 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC35.99■■■■□ 3.35
COL23A1Q86Y22 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.98■■■■□ 3.35
COL23A1Q86Y22 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
COL23A1Q86Y22 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC35.97■■■■□ 3.35
COL23A1Q86Y22 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC35.96■■■■□ 3.35
COL23A1Q86Y22 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC35.91■■■■□ 3.34
COL23A1Q86Y22 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC35.91■■■■□ 3.34
COL23A1Q86Y22 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
COL23A1Q86Y22 AC044849.2-201ENST00000606596 710 ntBASIC35.9■■■■□ 3.34
COL23A1Q86Y22 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.9■■■■□ 3.34
COL23A1Q86Y22 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC35.88■■■■□ 3.33
COL23A1Q86Y22 MIR762-201ENST00000390236 83 ntBASIC35.87■■■■□ 3.33
COL23A1Q86Y22 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
COL23A1Q86Y22 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC35.86■■■■□ 3.33
COL23A1Q86Y22 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC35.86■■■■□ 3.33
COL23A1Q86Y22 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.84■■■■□ 3.33
COL23A1Q86Y22 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
COL23A1Q86Y22 AC005559.1-201ENST00000589661 871 ntBASIC35.79■■■■□ 3.32
COL23A1Q86Y22 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC35.79■■■■□ 3.32
COL23A1Q86Y22 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.78■■■■□ 3.32
COL23A1Q86Y22 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
COL23A1Q86Y22 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.77■■■■□ 3.32
COL23A1Q86Y22 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
COL23A1Q86Y22 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.75■■■■□ 3.31
COL23A1Q86Y22 ZNRF2P2-203ENST00000454624 420 ntBASIC35.75■■■■□ 3.31
COL23A1Q86Y22 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
COL23A1Q86Y22 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
COL23A1Q86Y22 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.73■■■■□ 3.31
COL23A1Q86Y22 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.73■■■■□ 3.31
COL23A1Q86Y22 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC35.7■■■■□ 3.31
COL23A1Q86Y22 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC35.7■■■■□ 3.31
COL23A1Q86Y22 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
COL23A1Q86Y22 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
COL23A1Q86Y22 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
COL23A1Q86Y22 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
COL23A1Q86Y22 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL23A1Q86Y22 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL23A1Q86Y22 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC35.66■■■■□ 3.3
COL23A1Q86Y22 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.66■■■■□ 3.3
COL23A1Q86Y22 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL23A1Q86Y22 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
COL23A1Q86Y22 BOD1-206ENST00000480951 814 ntTSL 2 BASIC35.59■■■■□ 3.29
COL23A1Q86Y22 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
COL23A1Q86Y22 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
COL23A1Q86Y22 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.54■■■■□ 3.28
COL23A1Q86Y22 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC35.54■■■■□ 3.28
COL23A1Q86Y22 HGH1-207ENST00000628266 258 ntTSL 5 BASIC35.52■■■■□ 3.28
COL23A1Q86Y22 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
COL23A1Q86Y22 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.5■■■■□ 3.27
COL23A1Q86Y22 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
COL23A1Q86Y22 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.49■■■■□ 3.27
COL23A1Q86Y22 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.49■■■■□ 3.27
COL23A1Q86Y22 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
COL23A1Q86Y22 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
COL23A1Q86Y22 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC35.48■■■■□ 3.27
COL23A1Q86Y22 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
COL23A1Q86Y22 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.47■■■■□ 3.27
COL23A1Q86Y22 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
COL23A1Q86Y22 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.45■■■■□ 3.27
COL23A1Q86Y22 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
COL23A1Q86Y22 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
COL23A1Q86Y22 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
COL23A1Q86Y22 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.39■■■■□ 3.26
COL23A1Q86Y22 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC35.38■■■■□ 3.25
COL23A1Q86Y22 MIR4449-201ENST00000578365 66 ntBASIC35.36■■■■□ 3.25
COL23A1Q86Y22 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC35.35■■■■□ 3.25
COL23A1Q86Y22 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms