Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDHA1P08559 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
PDHA1P08559 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.33■■■□□ 2.13
PDHA1P08559 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.33■■■□□ 2.13
PDHA1P08559 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDHA1P08559 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDHA1P08559 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
PDHA1P08559 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDHA1P08559 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDHA1P08559 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.29■■■□□ 2.12
PDHA1P08559 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.26■■■□□ 2.11
PDHA1P08559 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDHA1P08559 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PDHA1P08559 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
PDHA1P08559 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
PDHA1P08559 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDHA1P08559 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDHA1P08559 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDHA1P08559 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.18■■■□□ 2.1
PDHA1P08559 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PDHA1P08559 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDHA1P08559 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.17■■■□□ 2.1
PDHA1P08559 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.16■■■□□ 2.1
PDHA1P08559 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDHA1P08559 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.13■■■□□ 2.09
PDHA1P08559 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDHA1P08559 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
PDHA1P08559 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDHA1P08559 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.1■■■□□ 2.09
PDHA1P08559 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.09■■■□□ 2.09
PDHA1P08559 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.09■■■□□ 2.09
PDHA1P08559 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PDHA1P08559 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDHA1P08559 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
PDHA1P08559 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDHA1P08559 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.06■■■□□ 2.08
PDHA1P08559 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.06■■■□□ 2.08
PDHA1P08559 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
PDHA1P08559 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PDHA1P08559 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
PDHA1P08559 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
PDHA1P08559 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.01■■■□□ 2.07
PDHA1P08559 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PDHA1P08559 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28■■■□□ 2.07
PDHA1P08559 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PDHA1P08559 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.98■■■□□ 2.07
PDHA1P08559 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDHA1P08559 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.97■■■□□ 2.07
PDHA1P08559 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.97■■■□□ 2.07
PDHA1P08559 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.95■■■□□ 2.07
PDHA1P08559 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.95■■■□□ 2.06
PDHA1P08559 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.95■■■□□ 2.06
PDHA1P08559 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
PDHA1P08559 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.92■■■□□ 2.06
PDHA1P08559 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PDHA1P08559 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PDHA1P08559 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PDHA1P08559 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.89■■■□□ 2.05
PDHA1P08559 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
PDHA1P08559 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PDHA1P08559 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.88■■■□□ 2.05
PDHA1P08559 RARRES2P7-201ENST00000567349 469 ntBASIC27.88■■■□□ 2.05
PDHA1P08559 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PDHA1P08559 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDHA1P08559 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PDHA1P08559 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PDHA1P08559 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.81■■■□□ 2.04
PDHA1P08559 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDHA1P08559 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
PDHA1P08559 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PDHA1P08559 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.75■■■□□ 2.03
PDHA1P08559 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.75■■■□□ 2.03
PDHA1P08559 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PDHA1P08559 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PDHA1P08559 SETD8P1-201ENST00000623146 1180 ntBASIC27.74■■■□□ 2.03
PDHA1P08559 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDHA1P08559 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDHA1P08559 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDHA1P08559 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
PDHA1P08559 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDHA1P08559 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDHA1P08559 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PDHA1P08559 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
PDHA1P08559 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
PDHA1P08559 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
PDHA1P08559 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PDHA1P08559 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.68■■■□□ 2.02
PDHA1P08559 AL133380.1-201ENST00000506013 324 ntBASIC27.68■■■□□ 2.02
PDHA1P08559 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDHA1P08559 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDHA1P08559 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDHA1P08559 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.63■■■□□ 2.01
PDHA1P08559 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDHA1P08559 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
PDHA1P08559 AC120057.4-201ENST00000624722 1615 ntBASIC27.62■■■□□ 2.01
PDHA1P08559 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms