Protein–RNA interactions for Protein: D6RBM5

USP17L23, Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 23, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L23D6RBM5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L23D6RBM5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L23D6RBM5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
USP17L23D6RBM5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.58■□□□□ 0.56
USP17L23D6RBM5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L23D6RBM5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L23D6RBM5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.56■□□□□ 0.56
USP17L23D6RBM5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L23D6RBM5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L23D6RBM5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L23D6RBM5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.51■□□□□ 0.55
USP17L23D6RBM5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L23D6RBM5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP17L23D6RBM5 AL161658.1-201ENST00000623641 1967 ntBASIC18.48■□□□□ 0.55
USP17L23D6RBM5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP17L23D6RBM5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
USP17L23D6RBM5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP17L23D6RBM5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.43■□□□□ 0.54
USP17L23D6RBM5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.43■□□□□ 0.54
USP17L23D6RBM5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP17L23D6RBM5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP17L23D6RBM5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP17L23D6RBM5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L23D6RBM5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
USP17L23D6RBM5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USP17L23D6RBM5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP17L23D6RBM5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP17L23D6RBM5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L23D6RBM5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L23D6RBM5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.32■□□□□ 0.52
USP17L23D6RBM5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L23D6RBM5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L23D6RBM5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.29■□□□□ 0.52
USP17L23D6RBM5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L23D6RBM5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP17L23D6RBM5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.26■□□□□ 0.51
USP17L23D6RBM5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L23D6RBM5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.26■□□□□ 0.51
USP17L23D6RBM5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L23D6RBM5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.24■□□□□ 0.51
USP17L23D6RBM5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.22■□□□□ 0.51
USP17L23D6RBM5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP17L23D6RBM5 RARRES2P7-201ENST00000567349 469 ntBASIC18.21■□□□□ 0.51
USP17L23D6RBM5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.2■□□□□ 0.5
USP17L23D6RBM5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.19■□□□□ 0.5
USP17L23D6RBM5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP17L23D6RBM5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP17L23D6RBM5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP17L23D6RBM5 AC139426.1-201ENST00000568218 2529 ntBASIC18.16■□□□□ 0.5
USP17L23D6RBM5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.16■□□□□ 0.5
USP17L23D6RBM5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP17L23D6RBM5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP17L23D6RBM5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP17L23D6RBM5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.13■□□□□ 0.49
USP17L23D6RBM5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP17L23D6RBM5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L23D6RBM5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.12■□□□□ 0.49
USP17L23D6RBM5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.12■□□□□ 0.49
USP17L23D6RBM5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP17L23D6RBM5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms