Protein–RNA interactions for Protein: D6RBM5

USP17L23, Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 23, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L23D6RBM5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L23D6RBM5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L23D6RBM5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
USP17L23D6RBM5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.58■□□□□ 0.56
USP17L23D6RBM5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L23D6RBM5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L23D6RBM5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.56■□□□□ 0.56
USP17L23D6RBM5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L23D6RBM5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L23D6RBM5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP17L23D6RBM5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.51■□□□□ 0.55
USP17L23D6RBM5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L23D6RBM5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP17L23D6RBM5 AL161658.1-201ENST00000623641 1967 ntBASIC18.48■□□□□ 0.55
USP17L23D6RBM5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP17L23D6RBM5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP17L23D6RBM5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP17L23D6RBM5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
USP17L23D6RBM5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP17L23D6RBM5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.43■□□□□ 0.54
USP17L23D6RBM5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.43■□□□□ 0.54
USP17L23D6RBM5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP17L23D6RBM5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP17L23D6RBM5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP17L23D6RBM5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP17L23D6RBM5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP17L23D6RBM5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP17L23D6RBM5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
USP17L23D6RBM5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USP17L23D6RBM5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP17L23D6RBM5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.34■□□□□ 0.53
USP17L23D6RBM5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP17L23D6RBM5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L23D6RBM5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP17L23D6RBM5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.32■□□□□ 0.52
USP17L23D6RBM5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP17L23D6RBM5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L23D6RBM5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L23D6RBM5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.29■□□□□ 0.52
USP17L23D6RBM5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L23D6RBM5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L23D6RBM5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP17L23D6RBM5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.26■□□□□ 0.51
USP17L23D6RBM5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L23D6RBM5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.26■□□□□ 0.51
USP17L23D6RBM5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L23D6RBM5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.24■□□□□ 0.51
USP17L23D6RBM5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.22■□□□□ 0.51
USP17L23D6RBM5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP17L23D6RBM5 RARRES2P7-201ENST00000567349 469 ntBASIC18.21■□□□□ 0.51
USP17L23D6RBM5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.2■□□□□ 0.5
USP17L23D6RBM5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.19■□□□□ 0.5
USP17L23D6RBM5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP17L23D6RBM5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP17L23D6RBM5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP17L23D6RBM5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP17L23D6RBM5 AC139426.1-201ENST00000568218 2529 ntBASIC18.16■□□□□ 0.5
USP17L23D6RBM5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.16■□□□□ 0.5
USP17L23D6RBM5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP17L23D6RBM5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP17L23D6RBM5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP17L23D6RBM5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP17L23D6RBM5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.13■□□□□ 0.49
USP17L23D6RBM5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP17L23D6RBM5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L23D6RBM5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.12■□□□□ 0.49
USP17L23D6RBM5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.12■□□□□ 0.49
USP17L23D6RBM5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP17L23D6RBM5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms