Protein–RNA interactions for Protein: A0A0C4DH26

IGKV6D-41, Immunoglobulin kappa variable 6D-41 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV6D-41A0A0C4DH26 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
IGKV6D-41A0A0C4DH26 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
IGKV6D-41A0A0C4DH26 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.78■■■□□ 2.84
IGKV6D-41A0A0C4DH26 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
IGKV6D-41A0A0C4DH26 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.76■■■□□ 2.83
IGKV6D-41A0A0C4DH26 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
IGKV6D-41A0A0C4DH26 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.75■■■□□ 2.83
IGKV6D-41A0A0C4DH26 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.75■■■□□ 2.83
IGKV6D-41A0A0C4DH26 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.71■■■□□ 2.83
IGKV6D-41A0A0C4DH26 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
IGKV6D-41A0A0C4DH26 AL133380.1-201ENST00000506013 324 ntBASIC32.7■■■□□ 2.83
IGKV6D-41A0A0C4DH26 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.69■■■□□ 2.82
IGKV6D-41A0A0C4DH26 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
IGKV6D-41A0A0C4DH26 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
IGKV6D-41A0A0C4DH26 SUZ12P1-203ENST00000578195 985 ntBASIC32.68■■■□□ 2.82
IGKV6D-41A0A0C4DH26 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
IGKV6D-41A0A0C4DH26 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.64■■■□□ 2.82
IGKV6D-41A0A0C4DH26 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.62■■■□□ 2.81
IGKV6D-41A0A0C4DH26 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
IGKV6D-41A0A0C4DH26 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
IGKV6D-41A0A0C4DH26 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
IGKV6D-41A0A0C4DH26 CAHM-201ENST00000604200 896 ntBASIC32.62■■■□□ 2.81
IGKV6D-41A0A0C4DH26 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.62■■■□□ 2.81
IGKV6D-41A0A0C4DH26 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.6■■■□□ 2.81
IGKV6D-41A0A0C4DH26 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
IGKV6D-41A0A0C4DH26 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
IGKV6D-41A0A0C4DH26 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.56■■■□□ 2.8
IGKV6D-41A0A0C4DH26 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
IGKV6D-41A0A0C4DH26 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
IGKV6D-41A0A0C4DH26 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.53■■■□□ 2.8
IGKV6D-41A0A0C4DH26 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.52■■■□□ 2.8
IGKV6D-41A0A0C4DH26 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
IGKV6D-41A0A0C4DH26 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
IGKV6D-41A0A0C4DH26 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
IGKV6D-41A0A0C4DH26 AL391121.1-201ENST00000607967 1349 ntBASIC32.49■■■□□ 2.79
IGKV6D-41A0A0C4DH26 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
IGKV6D-41A0A0C4DH26 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.48■■■□□ 2.79
IGKV6D-41A0A0C4DH26 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.48■■■□□ 2.79
IGKV6D-41A0A0C4DH26 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
IGKV6D-41A0A0C4DH26 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
IGKV6D-41A0A0C4DH26 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
IGKV6D-41A0A0C4DH26 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.45■■■□□ 2.79
IGKV6D-41A0A0C4DH26 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
IGKV6D-41A0A0C4DH26 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
IGKV6D-41A0A0C4DH26 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
IGKV6D-41A0A0C4DH26 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
IGKV6D-41A0A0C4DH26 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
IGKV6D-41A0A0C4DH26 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
IGKV6D-41A0A0C4DH26 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
IGKV6D-41A0A0C4DH26 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.37■■■□□ 2.77
IGKV6D-41A0A0C4DH26 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
IGKV6D-41A0A0C4DH26 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
IGKV6D-41A0A0C4DH26 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
IGKV6D-41A0A0C4DH26 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
IGKV6D-41A0A0C4DH26 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
IGKV6D-41A0A0C4DH26 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
IGKV6D-41A0A0C4DH26 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.29■■■□□ 2.76
IGKV6D-41A0A0C4DH26 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
IGKV6D-41A0A0C4DH26 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.29■■■□□ 2.76
IGKV6D-41A0A0C4DH26 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
IGKV6D-41A0A0C4DH26 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
IGKV6D-41A0A0C4DH26 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
IGKV6D-41A0A0C4DH26 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
IGKV6D-41A0A0C4DH26 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
IGKV6D-41A0A0C4DH26 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
IGKV6D-41A0A0C4DH26 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
IGKV6D-41A0A0C4DH26 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.25■■■□□ 2.75
IGKV6D-41A0A0C4DH26 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
IGKV6D-41A0A0C4DH26 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
IGKV6D-41A0A0C4DH26 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.23■■■□□ 2.75
IGKV6D-41A0A0C4DH26 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.21■■■□□ 2.75
IGKV6D-41A0A0C4DH26 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.2■■■□□ 2.74
IGKV6D-41A0A0C4DH26 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
IGKV6D-41A0A0C4DH26 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.18■■■□□ 2.74
IGKV6D-41A0A0C4DH26 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.17■■■□□ 2.74
IGKV6D-41A0A0C4DH26 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
IGKV6D-41A0A0C4DH26 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
IGKV6D-41A0A0C4DH26 WASH5P-204ENST00000632292 975 ntBASIC32.16■■■□□ 2.74
IGKV6D-41A0A0C4DH26 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.15■■■□□ 2.74
IGKV6D-41A0A0C4DH26 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
IGKV6D-41A0A0C4DH26 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
IGKV6D-41A0A0C4DH26 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
IGKV6D-41A0A0C4DH26 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.11■■■□□ 2.73
IGKV6D-41A0A0C4DH26 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
IGKV6D-41A0A0C4DH26 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
IGKV6D-41A0A0C4DH26 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
IGKV6D-41A0A0C4DH26 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
IGKV6D-41A0A0C4DH26 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
IGKV6D-41A0A0C4DH26 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
IGKV6D-41A0A0C4DH26 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.08■■■□□ 2.73
IGKV6D-41A0A0C4DH26 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.07■■■□□ 2.72
IGKV6D-41A0A0C4DH26 RPS2P35-201ENST00000443417 897 ntBASIC32.07■■■□□ 2.72
IGKV6D-41A0A0C4DH26 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
IGKV6D-41A0A0C4DH26 AL162393.1-201ENST00000437852 946 ntBASIC32.05■■■□□ 2.72
IGKV6D-41A0A0C4DH26 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.05■■■□□ 2.72
IGKV6D-41A0A0C4DH26 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
IGKV6D-41A0A0C4DH26 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.02■■■□□ 2.72
IGKV6D-41A0A0C4DH26 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
IGKV6D-41A0A0C4DH26 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.02■■■□□ 2.72
IGKV6D-41A0A0C4DH26 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.02■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms